Pseudomonas aeruginosa AZPAE14931, NS47_RS15695
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14931 AZPAE14931_contig_10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCCAGCAAGATCGACTCGCGCACCATCCTCGACCAGGGTGGCGCCGAACAACTTCTCGGCCACGGCGACATGCTCTACCTGCCGCCGGGCACAGGCCTG CCGATTCGCGTGCACGGCGCCTTCGTTTCCGACGACGAGGTGCACCGGGTGGTCGAGGCCTGGAAGCTGCGCGGCGCGCCCGACTACATCGAGGACATCC TCGCTGGCGTCGACGAAGGCGGCAGCGGTGGCGGTTCCTTCGATGGCGGCGACGGCTCCGGCGAGGGCAGCGAGGACGACCCGCTCTACGACGAGGCGGT ACGTTTCGTCACCGAGAGTCGCCGGGCATCGATCTCCGCCGTGCAACGCAAGCTGAAGATCGGCTACAACCGCGCCGCGCGGATGATCGAGGCGATGGAG ATGGCCGGCGTGGTCACCCCGATGAATACCAACGGCTCCCGCGAAGTCATCGCGCCGGCGCCGGTTCGTGATTGAACCCGACAGGTTTTAGAGGATTCCG
|
|
| DNA Sequence for Gene |
>NS47_RS15695
ATGCGACTGATCCGCACGTTGTTCGTTGCCGCCCTGGCCATGGGCGCTTCGCTGGCCCATGCCGATGACAGCGCCGCTGTCCAGCGCCTGACCGGCCTGC TGAACAAGGCCCAGACCCTGACCGCGCGTTTTTCCCAACTGACCCTGGACGGTAGCGGCACGCGCTTGCAGGAAACCGCCGGCCAACTGAGCCTGAAGCG GCCGGGACTGTTCCGCTGGCATACCGATGCGCCGAACGAGCAATTGCTCATTTCCAACGGCGAGAAGGTCTGGCTGTACGACCCGGACCTGGAGCAGGTG ACCATCCAGAAGCTCGATCAGCGCCTGACCCAGACGCCGGCGCTGCTGCTCTCCGGCGACATCTCGAAGATCAGCGAAAGCTTCGCCATCACCTACAAGG AAGGCGGCAACGTAGTCGATTTCGTGCTCAAGCCGAAGACCAAGGACACCCTCTTCGACACCTTGCGTCTGTCGTTCCGCAGCGGCAAGGTGAACGACAT GCAGATGATCGATGGCGTCGGCCAGCGCACCAACATCCTGTTCTTCGACGTGAAGATGAACGAGGCGCTGGATGCCAAGCAATTCACCTTCGACGTTCCG CCGGGCGTCGACGTGATCCAGGAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGCAAGCCGTGGATCTGTTCCGCAGCGAGCCCGTCGCGCAGCCCCTGGCGGCACGGCTGAGGCCCGCAAACCTGGACGAGTACGTGGGGCAGGAACACC TGCTGGCCCGCGGCAAGCCCTTGCGCGAGGCGCTGGAGCAGGGCGCGCTGCACTCGATGATCTTCTGGGGCCCGCCGGGAGTCGGCAAGACTACCCTGGC GCGGCTGCTGGCGCAGGTGTCGGACGCCCATTTCGAGACCATTTCCGCGGTGCTGTCCGGGGTCAAGGAGATCCGCCAGGCGGTCGAGGTGGCCAAGCAG CACGCGGCGCAATACGGGCGCCGGACCATCCTGTTCGTCGATGAGGTGCACCGCTTCAACAAGAGCCAGCAGGATGCCTTCCTGCCCTATGTGGAAGACG GCACGCTGATCTTCATTGGCGCGACCACCGAGAACCCGTCCTTCGAGTTGAACAATGCGCTGCTCTCGCGGGCTCGCGTGTATGTCCTCAAGAGCCTCGA
|
|
| Amino Acid Sequence |
>membrane protein
MRLIRTLFVAALAMGASLAHADDSAAVQRLTGLLNKAQTLTARFSQLTLDGSGTRLQETAGQLSLKRPGLFRWHTDAPNEQLLISNGEKVWLYDPDLEQV TIQKLDQRLTQTPALLLSGDISKISESFAITYKEGGNVVDFVLKPKTKDTLFDTLRLSFRSGKVNDMQMIDGVGQRTNILFFDVKMNEALDAKQFTFDVP PGVDVIQE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|