Strain | Pseudomonas aeruginosa strain AZPAE14931 AZPAE14931_contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCAGCGCGCCTACGCGCCACTGGGAGCCTTGCTGCCATCGTGCGCCGGGCTGGTCCATCCGGGCGGTATCGGCGCCATGAGCCTGGCCTTGGCGGCGGGG GTGCCGCAGGTGCTGCTGCCCTGCGCCCACGACCAGTTCGACAATGCCGAACGGCTGGTCCGGCTCGGCTGCGGGATGCGCCTGGGCGTGCCGTTGCGCG AGCAGGAGTTGCGCGGGGCGCTGTGGCGCTTGCTCGAGGACCCGGCCATGGCGGCGGCCTGTCGGCGTTTCATGGAATTGTCACAACCGCACAGTATCGC TTGCGGTAAAGCGGCCCAGGTGGTCGAACGTTGTCATAGGGAGGGGGATGCGCGATGGCTGAAGGCTGCGTCCTGAACGGTGCTGGCATAACAGATAGGG TTGCCATGATTTTGCCGTATCGGCAAGGCTGCGCGCTTGACAGCGTCATACCCCGGGCCAATTCTGCTGTGATGCATTTTATCGATCAGGGCTTACTGCA
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DNA Sequence for Gene |
>NS47_RS02345
ATGAGGAATGACGGAGGCTTTTTGCTGTGGTGGGACGGTTTGCGTAGCGAGATGCAGCCGATCCACGACAGCCAGGGCGTGTTCGCCGTCCTGGAAAAGG AAGTGCGGCGCCTGGGCTTCGATTACTACGCCTATGGCGTGCGCCATACGATTCCCTTCACCCGGCCGAAGACCGAGGTCCATGGCACCTATCCCAAGGC CTGGCTGGAGCGATACCAGATGCAGAACTACGGGGCCGTGGATCCGGCGATCCTCAACGGCCTGCGCTCCTCGGAAATGGTGGTCTGGAGCGACAGCCTG TTCGACCAGAGCCGGATGCTCTGGAACGAGGCTCGCGATTGGGGCCTCTGTGTCGGCGCGACCCTGCCGATCCGCGCGCCGAACAATTTGCTCAGCGTGC TTTCCGTGGCGCGCGACCAGCAGAACATCTCCAGCTTCGAGCGCGAGGAAATACGCCTGCGGCTGCGTTGCATGATCGAGTTGCTGACCCAGAAGCTGAC CGACCTGGAGCATCCGATGCTGATGTCCAACCCGGTCTGCCTGAGCCATCGCGAACGCGAGATCCTCCAATGGACCGCCGACGGCAAGAGCTCCGGGGAA ATCGCCATCATCCTGAGCATCTCCGAGAGCACGGTGAACTTCCACCACAAGAACATCCAGAAGAAGTTCGACGCGCCGAACAAGACGCTGGCTGCCGCCT ACGCCGCGGCGCTGGGCCTCATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCGCAGGGCGCGCCGGCCGGCGCGCCCTACCAGATCTGGCAGGTTGCCTGCCGTTCATCCTCCTTTAGTCTTCCCCCTCATGTGTGTGCTGGTATGTCC TCCGACTGAGAGGGCCCAGGAGTATCAGGGTAGGGATGCCGCCTTTTTTTCTCGGCCGGCACGACACGGGGACTTGGTCATGATCGAATTGCTCTCTGAA TCGCTGGAAGGGCTTTCCGCCGCCATGATCGCCGAGCTGGGACGCTACCGGCATCAGGTCTTCATCGAGAAGCTGGGCTGGGACGTGGTCTCCACCTCCA GGGTCCGCGACCAGGAGTTCGACCAGTTCGACCATCCGCAAACCCGCTACATCGTCGCCATGGGCCGCCAGGGTATCTGCGGTTGTGCCCGCCTGTTGCC GACGACCGACGCCTACCTGCTCAAGGAAGTCTTCGCCTACCTGTGCAGCGAAACCCCGCCCAGCGATCCGTCGGTATGGGAGCTTTCGCGCTACGCCGCC
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Amino Acid Sequence |
>LuxR family transcriptional regulator
MRNDGGFLLWWDGLRSEMQPIHDSQGVFAVLEKEVRRLGFDYYAYGVRHTIPFTRPKTEVHGTYPKAWLERYQMQNYGAVDPAILNGLRSSEMVVWSDSL FDQSRMLWNEARDWGLCVGATLPIRAPNNLLSVLSVARDQQNISSFEREEIRLRLRCMIELLTQKLTDLEHPMLMSNPVCLSHREREILQWTADGKSSGE IAIILSISESTVNFHHKNIQKKFDAPNKTLAAAYAAALGLI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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