Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4768 (betI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00440
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46689 Homeodomain-like IPR009057 Homeobox-like domain superfamily 5 77 4.05E-14
NCBIfam TIGR03384 JCVI: transcriptional regulator BetI IPR017757 Transcriptional repressor BetI 2 192 2.4E-75
SUPERFAMILY SSF48498 Tetracyclin repressor-like, C-terminal domain IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily 82 192 2.17E-19
Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. IPR017757 Transcriptional repressor BetI 1 197 110.219818
Gene3D G3DSA:1.10.357.10 Tetracycline Repressor, domain 2 - - 6 196 8.1E-42
PANTHER PTHR30055 HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR - - 8 179 6.0E-12
Pfam PF00440 Bacterial regulatory proteins, tetR family IPR001647 DNA-binding HTH domain, TetR-type 14 59 6.5E-8
Pfam PF13977 BetI-type transcriptional repressor, C-terminal IPR039538 BetI-type transcriptional repressor, C-terminal 84 189 6.6E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.