Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4751 (soxB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008115 sarcosine oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01373
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0046653 tetrahydrofolate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01373
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01266
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc creatinine degradation II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG psp00260 Glycine, serine and threonine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc glycine betaine degradation I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01266 FAD dependent oxidoreductase IPR006076 FAD dependent oxidoreductase 34 380 9.0E-54
NCBIfam TIGR01373 JCVI: sarcosine oxidase subunit beta family protein IPR006278 Sarcosine oxidase subunit beta 3 408 0.0
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 33 402 7.5E-47
PANTHER PTHR13847 SARCOSINE DEHYDROGENASE-RELATED - - 26 408 5.2E-31
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 34 389 1.0E-110
Gene3D G3DSA:3.30.9.10 - - - 115 347 1.0E-110

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.