Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4664
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AATGCCTTGGCAACGCTGGCGGCTGCTCGCCACGTGGGCGTTGTGCCTTCGCTGGGCGTACAGGCACTCAGCGCCTTCAAGAGCGTCAAGCGGCGCATGG AAAAGGTCGCCGAGGTGCGCGGCATCACTATTTATGATGACTTCGCTCACCACCCGACAGCCATTGCCACCACGCTGGATGGCCTGCGCAAGAAAATCGG TGATGCGCCGATCATTGCCGTTATCGAGCCGCGTTCCAATTCCATGAAGCTCGGCGCGCACCGCGACGGTCTGCCGGAAAGCGTGAGTCAGGCAGATCAG GTGGTCTGGTATGCCCCGCCCAATCTTGGCTGGGACCTGGCGGCTACGGTCGCTGGAGGCAGCGTACCCTCGACGGTATGTGATTCGCTTGAAGCAATCA TCGCGCGAGTCCATAGCCAGGTGCAGCCCGGCACGCATATCGTCATCATGAGCAACGGCGGCTTTGGCGGCCTGCACGGCAAACTGGCCGAGGCGCTGAA
|
|
| DNA Sequence for Gene |
>PSPPH_4664
ATGAGCGGCCCGGAGCGCGTTACGGTTGCGATGACCGGCGCTTCTGGCGCGCAATATGGCCTGCGCTTGCTGGATTGTCTGGTGCGTGAGGACCGGGAGG TGCACTTCCTGATCTCCAAGGCCGCGCAGTTGGTAATGGCCACCGAGACCGACGTACGTCTGCCACCCAAACCGATGATGATGCAGGCGTTTCTGACGGA ATACACCGGCGCGTCTGCCGGGCAGATTCGCGTTTATGGTCGTGACGACTGGATGTCGCCAGTGGCGTCAGGTTCTGGTTCGCCCAGCGCAATGGTGGTG GTGCCATGCTCCACCGGTTCGCTGTCGGCAATTGCTACCGGGGCCTGCAACAATTTGATCGAACGCGCTGCCGACGTCACGCTCAAGGAGCGTCGCCAGT TGATTCTGGTGCCCCGCGAGGCTCCGTTTTCCAGTATTCATCTGGAGAACATGCTCAAGCTGTCGAACATGGGTGCGGTGATTCTGCCCGCATCTCCGGG CTTTTATCATCAGCCGCAGACCATCGACGATCTGGTGGACTTTGTCGTCGCGCGGATTCTCAATCTGCTGAATATTCCTCAAGACATGCTGCCGCGTTGG GGCGAGCACCACATTGGCGGCGATGAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCTGCTGCTGGTAGCGCTTGCGCTGACGCTGACTGGCTGCGCCACCGCGCGCACGCTCAATGCGGCTAAACCTGGCGCGCCGGTGGTGTATGCAGGCACG CGGTTGAATATGTATGCGCTGCAGGGTTGTTGCTGTGCTGCTGACCGTTTCGGTGCCGAAGCACCGAGCTATCCGGGCCTGGACCTGCCGGGCAGCGCGC TGCTCGACACCTTGTTGCTGCCGCTGTCATTGCTGACGGCAGCGGGACTAGGGGTTCAGGCTACGGGCGGGCTTTAGGGTTACCGGTGCAACACCTGCGC TATCAGGTAATGCTCCCTTGGGTGACGCAGAGCGTCACGAATTGCATTCCCACGCGGAGCATGGGAACGATCATGCGATGGGCTGGAAAACGATCATCGT CCGGCCGCAGCGACCGTCATCTACTTGCCCAGCTTGCGCAGTTCATCCGACTCGACGATACGCTCGCCATTCTGCTCTTCCAGCGCCAGGCGCCACATGG
|
|
| Amino Acid Sequence |
>aromatic acid decarboxylase
MSGPERVTVAMTGASGAQYGLRLLDCLVREDREVHFLISKAAQLVMATETDVRLPPKPMMMQAFLTEYTGASAGQIRVYGRDDWMSPVASGSGSPSAMVV VPCSTGSLSAIATGACNNLIERAADVTLKERRQLILVPREAPFSSIHLENMLKLSNMGAVILPASPGFYHQPQTIDDLVDFVVARILNLLNIPQDMLPRW GEHHIGGDE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|