Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4505 (ribBA2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009231 riboflavin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00506
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00506
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp00740 Riboflavin metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00506 JCVI: 3,4-dihydroxy-2-butanone-4-phosphate synthase IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB 3 199 7.3E-73
Gene3D G3DSA:3.40.50.10990 GTP cyclohydrolase II IPR036144 GTP cyclohydrolase II superfamily 206 363 1.6E-29
SUPERFAMILY SSF142695 RibA-like IPR036144 GTP cyclohydrolase II superfamily 204 361 2.35E-42
SUPERFAMILY SSF55821 YrdC/RibB IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily 2 203 3.89E-85
FunFam G3DSA:3.90.870.10:FF:000001 Riboflavin biosynthesis protein RibBA - - 1 205 2.9E-95
Gene3D G3DSA:3.90.870.10 DHBP synthase - - 1 205 1.9E-87
PIRSF PIRSF001259 RibA - - 1 363 8.5E-117
Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB 7 198 1.5E-81
PANTHER PTHR21327 GTP CYCLOHYDROLASE II-RELATED - - 2 361 1.1E-96
Pfam PF00925 GTP cyclohydrolase II IPR032677 GTP cyclohydrolase II 208 361 5.5E-32
Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB 1 203 38.343998

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.