Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4185 (pnp)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4185
Name
pnp
Replicon chromosome
Genomic location 4771859 - 4773964 (- strand)

Cross-References

RefSeq YP_276307.1
GI 71734516
EC Number 2.7.7.8
Entrez 3556827
INSDC AAZ34280.1
NCBI Locus Tag PSPPH_4185
UniParc UPI0000575EBA
UniProtKB Acc Q48E81
UniProtKB ID PNP_PSE14
UniRef100 UniRef100_Q48E81
UniRef50 UniRef50_Q3IJ73
UniRef90 UniRef90_Q87WQ8

Product

Feature Type CDS
Coding Frame 1
Product Name
polynucleotide phosphorylase
Synonyms
Evidence for Translation
Charge (pH 7) -15.14
Kyte-Doolittle Hydrophobicity Value -0.005
Molecular Weight (kDa) 74.9
Isoelectric Point (pI) 5.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 662 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004385 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4185
Search term: pnp

Human Homologs

Ensembl 110, assembly GRCh38.p14
polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
E-value: 1.5e-110
Percent Identity: 36.2
Ensembl 110, assembly GRCh38.p14
polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
E-value: 1.5e-110
Percent Identity: 36.2

References

No references are associated with this feature.