Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3945 (pdxJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0008615 pyridoxine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00279
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00279
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0033856 pyridoxine 5'-phosphate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00279
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp00750 Vitamin B6 metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.20.20.70:FF:000042 Pyridoxine 5'-phosphate synthase - - 4 246 3.3E-121
SUPERFAMILY SSF63892 Pyridoxine 5'-phosphate synthase IPR036130 Pyridoxine 5'-phosphate synthase 7 242 2.09E-94
NCBIfam TIGR00559 JCVI: pyridoxine 5'-phosphate synthase IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 9 241 9.4E-95
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 1 246 2.9E-112
Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 9 241 2.0E-99
Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 1 246 122.973839
CDD cd00003 PNPsynthase IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 8 241 3.04531E-130
PANTHER PTHR30456 PYRIDOXINE 5'-PHOSPHATE SYNTHASE IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 7 244 1.1E-102

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.