Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3697 (cobQ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GATAACACGCCGGGCCTGAGCCTGGCTGCCGAAACGTGGCGCACCGGGCTGATTGTGCTGCGCTCGTTCGGCAAGTTTTTTGGCCTGGCCGGTGTCAGGC TCGGTTTTGTCATGGCTGAGCCGGTATTGCTGAGGATGCTGGCGCAGGAAATCGGCCCATGGTCGGTCAGCGGGCCAACACGAATCATCGGTCAGGTGTG CCTCAATGATCAGCAGGGGCAGGCGCGTCAACGTGAGCGCTGTGATCAGGCCCGCGACCGGCTGGTGGCGTTGCTCGACCGCTACGCCCTGGCCCCGCAA GGCGGCTGTGCGCTGTTCCAATGGCTGGTGACCCCTGAGGCGCAGACGCTCTATGAGTTTTGTGCGCGGCGCGGTGTGCTGCTGCGTCTGTTCAAGGGTG ACACCTCCGAGTCGTCCAGTCTGCGTTTCGGTCTGCCCCGTGAGGAGGCCGACTGGCTGCGGCTGCACGATGTTCTGCTTGAATACCGCAAGGAATACCC
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| DNA Sequence for Gene |
>PSPPH_3697
|cobQ
ATGACCACGCTGATGGTACAAGGCACCACCTCCGATGCCGGCAAAAGCACTCTGGTGACGGCCCTGTGCCGCTGGCTGACTCGTCAGGGCGTCAAGGTCG TGCCGTTCAAGCCGCAGAACATGGCGCTCAACAGCGCGGTGACTGCAGACGGCGGCGAGATCGGCCGCGCGCAGGCCGTGCAGGCGCAGGCGTGCTTTCT GCAGCCGCACACCGACATGAACCCGGTGCTGCTCAAGCCCAACAGTGACACGGGCGCGCAGGTGATCATTCACGGCCGTGCGGTCACCACCATGAACGCG GTGGCGTATCACGGCTACAAAGAGATCGCCATGCAGGCGGTGCTGGAATCCCATCGGCGCCTGGGTGAAAGCTACCCGGTGATCATGGTCGAAGGCGCGG GCTCTCCGGCCGAGATCAACCTGCGCGCCAACGATATCGCCAACATGGGCTTTGCCGAGGCGGTCGACTGCCCGGTGTTGCTGATTGCCGATATCAATCG CGGCGGGGTCTTTGCCCATCTGGTTGGCACGCTGGAGTTGCTGTCGCCCAGCGAACAGGCGCGGGTCAAGGGGTTCATCATCAACCGTTTTCGCGGCGAC ATCGCCTTGCTGCAACCGGGCCTGGACTGGCTGGAGGCGCGCACCGGCAAACCGGTGGTTGGCGTGTTGCCTTATGTAATGGACCTGCACCTGGAGGCCG AAGACGGTCTCGATCAGCGTCAGACCGACAAGGTCGAGCATGTGCTGAACGTGGTGGTCCCGGTGCTGCCTCGCATCAGTAATCACACTGATTTCGACCC GCTGCGCCTGCACCCTCAGGTCAATCTGCAGTTCATCGGTCCCGGCCAGGCGATTCCTCCTGCGGACCTGATCATTCTGCCCGGCTCGAAAAGCGTGCGC AGCGATCTGAACTACCTGCGCAACAGTGGCTGGGACACCGCCATCGAGCGGCATTTGCGTTATGGCGGCAAGCTGATGGGGATCTGCGGCGGCCTGCAAA TGCTCGGTGAGCAGGTGCACGATCCTCTCGGGCTGGAAGGCGCAGCGGGGTCCAGCGCCGGGTTTGGCCTACTGGCAATGAGCACGGTGCTGGAAGCGGA AAAGCAACTGCGCAATGTGCGCGGTCGTCTGACCCTGGAAGACGCCGAGGTCAGCGGCTACGAAATTCATGCCGGGGTAACGACAGGGCCGGCCCTGGAG CAGGCTGCCGTGCAACTGGACGACGGGCGTTGCGATGGCGCGCAGAGTGTCGACGGACAGGTGCTCGGGACTTACCTGCACGGCCTGTTCGAATCACCTG CGGCCTGTAGCGCGTTACTGCGCTGGGCGGGGTTGGCGAACGTGCAGTCCGTCGACTATCACGCCCTGCGTGAGCGCGACATCGAACGTCTGGCGGACCT GGTGGAAAAACACCTGGACGGCCCATTGCTTCGCGAACTGTGTGGCCTGGAGGCGAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATGCTGCAATTGATCCTCGGCGGCGCGCGTTCCGGCAAAAGTCGCCTGGCGGAAAAACTGGCCGCCGACAGCACGCTGAAGGTGACCTACATCGCCACCA GTCAGCCTCTGGACGGCGAAATGAATCAGCGCGTGGCCAGCCATCGCGCCCGTCGCCCCGAACACTGGGGGCTGGTCGAAGAACCGCTCGAGCTGGCGCG GGTGCTGCGCGAAAATGCGGCACCCGATTGCTGCCTGCTAGTCGATTGCCTGACCCTCTGGCTGACCAATCTGCTGATGCTCGACAACCCCGAGCGCCTG CTTCAAGAACGTGAATCCCTGCTCGACAGCCTTGCCGGGCTGCCGGGTGAAATCATTTTTGTCAGCAACGAAACCGGGCTTGGCGTCGTGCCGCTCGGCG AACTGACCCGTCGCTATGTCGATGAAGCCGGCCTGTTGCATCAGGCGCTGGCCGAGCGTTGCCAGCGTGTCGTGTTGACCGTTGCCGGCTTGCCCCTGAC
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| Amino Acid Sequence |
>cobyric acid synthase
MTTLMVQGTTSDAGKSTLVTALCRWLTRQGVKVVPFKPQNMALNSAVTADGGEIGRAQAVQAQACFLQPHTDMNPVLLKPNSDTGAQVIIHGRAVTTMNA VAYHGYKEIAMQAVLESHRRLGESYPVIMVEGAGSPAEINLRANDIANMGFAEAVDCPVLLIADINRGGVFAHLVGTLELLSPSEQARVKGFIINRFRGD IALLQPGLDWLEARTGKPVVGVLPYVMDLHLEAEDGLDQRQTDKVEHVLNVVVPVLPRISNHTDFDPLRLHPQVNLQFIGPGQAIPPADLIILPGSKSVR SDLNYLRNSGWDTAIERHLRYGGKLMGICGGLQMLGEQVHDPLGLEGAAGSSAGFGLLAMSTVLEAEKQLRNVRGRLTLEDAEVSGYEIHAGVTTGPALE QAAVQLDDGRCDGAQSVDGQVLGTYLHGLFESPAACSALLRWAGLANVQSVDYHALRERDIERLADLVEKHLDGPLLRELCGLEAN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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