Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3675
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AACTCGATTCTGCGATCCGCGATCTGCCACAAGGTCTGGACAGCGTGGTAGGGCGCTCCGGGGTCAGAATGTCGGGTGGCCAGCGTCAGCGCATGGCCAT CGCACGCATGGTATTGTCCGACCCTAAAGTGGTTATCCTCGATGAAGCTACCTCGGCGCTGGACGCGGCTACCGAGTACAACCTGCATCAGGCCCTCGCA CGTTTTCTGCGTAGTCGCACAACGCTGATCATCGCGCACCGCCTGTCGGCCGTGAAGCAGGCTGACCGGGTGCTGGTGTTTGATGGCGGGCGGATTGTCG AAGACGGCGGACACCAACAGTTGATTGCCGATGGAGGTCTTTACGCAAAGCTGTACGGACACTTGCAACAAATCTGATGTGCGATGCTTCGATCAGCGCA CAGGTTGGCTCGATTGCGGGAGAATCACCTGCCATCATTCACGAATCTAGCCTAGTCTCTGCGCTAGACGTTTATTCAGGCATGTGGTGAGGTGAAACCC
|
|
| DNA Sequence for Gene |
>PSPPH_3675
ATGAAACAACCATGGACCTTCTCCAAGCCCCGTCTGTTGGGCATCGTATGGCCATTCATTGCCGTCGCGCTGTTTCAGGCATTGCTGGGGTGTGTCAGCC TCTACACCATGTCTGCGGTGCGCAGCTATGTGGCGGGCGAGAGTCTCTGGTCCAAGGGCCAGAAAGATGCCATCCATTACCTGAGCCTATACGCCATCAC GCATGATGAGCGTGACTATCTGAAGTATCAAAACGCCTTTTCCGTTCCTCAGGGTGGTCACGCCTTGCGCAAGGCGCTCGATCAGCCCATTCCTTCCATG GCAGATGCCAGGGCCGGGATCATCCAGGGCGGCAATCACCCCGATGACGCTAATGGCATCATCTGGATGTACCTGAACTTCCATAACTTCAGCTTCATGA AGCAGGCCATTCACTTTTGGGAGGTGGGTGATGGCTACCTCATACAGCTCAATGAGCTTGCCCGGCATATTCACGACCGGGTCGGTGAGGGCGGCGTATC TGCCGCCGAGGTCAATCAGTGGCGAGTGCAGATCAATGTCATCAATGAAGGGGTAACGCCCGCAGCACGGGCGTTCAGTGATGCGCTGGGCGAGGGGTCC AGGTTTATCCTCAACCTGCTGATTGCGGTCAATCTGGTCACCGCCGTTTTACTGATTCTTCTGGCGCTGCTGCGTGTGCGTCGTCTGATTGTCCAGCGGC GCGTGTTTGCTGATGCCCTGCAACTTGAGAAAGAGCGCGCCCAGATTACCCTGGAGTCCATCGGCGACGGGGTGATCACCATCGACGTGGCCGGGGCCAT TGTCTATATGAACCCTGCAGCCGAGGGCCTGACGCACTGGAAAAGCACCCAGGCCAGCGGGCTTCCGCTGACAGCGCTGTTCAATCTGCTGGATGAAAAC GATCAGAAGGACACCTCGACGCTGGTCGAACAGATCGTCACCGGCAAGCTCAAGGGCGGCAGCGCCAACAGCAAGCTTATCCAGCGGCTGGATGGCAGTA CGGTCTCGGTAGCACTGGTCGGTACGCCGATCTACAACGAGGGGGTGGTCAGCGGGGCGGTGCTGGTACTGCATGACATGACACAGGAGCGTCAGTACAT CGCCGATCTGTCATGGCAGGCCGCCCATGATCCGCTGACCGGGCTGGTCAATCGCAGTGAATTCGAGCATCGCCTGCAGCGGGTACTGGATGGTATTGAC GATCAGGCGAGCAGCCACTGTCTGATGTTTCTTGACCTGGACCAGTTCAAACTGGTCAATGACACCGGTGGTCATGCGGCGGGCGATGAGCTGCTGCGCC AGCTTTGCCGGGCACTGCCGCAGGGCTTGCGCGACGGTGACACACTGGCCCGGCTGGGAGGTGACGAGTTCGGCGTGTTGCTGGTCGATTGCCCTGCCGA CACGGCCCTCGATATAGCCGAGGGGTTGCGCGAGATCGTGCAGACCCTGCATTTCATGTGGAAAGGTCGGCCATTCATGACTACCGTAAGTATCGGTCTG GTGCAGCTCGGCGATACACCCGCCACGCTTGAAGGGTCGTTGTCTGCTGCCGACATGGCCTGTTATATGGCCAAGGAGAGAGGCCGCAACCGGGTTCAGG TCTACAGTGTTGACGACCTGACCCTGTCGATGCGTTTCGGCGAGATGGCCTGGATACAACGTCTGCACATGGCAATGGATGAAAATCGCTTTTGCCTTTA TGCGCAGGAAATCGCTTCGATCAAAGGTGAAGGCGATGAGGTGCGGCACATAGAAATCCTCCTGCGCCTGCGTGATGAGTCCGGACGAATGGTGGTTCCG GACAACTTTATCCCGGCTGCCGAGCGCTACGGCCTTATGACGACGCTGGATCGTTGGGTGGTGCACAATGTCTTCAAAGTGATCGCCCAATGCCAGAGTG ATGATCGGCATCAGGCACCGCAGGCGCTATGTGCTATAAATTTGTCAGGTTCAAGTATCGGCGATGATACGTTCCTCGAATACCTGAAACAGCAGTTCAA GGCATTTGCCGTATCGCCCGGAATGATCTGTTTCGAGATCACTGAAACCAGTGCCATTGCAGACCTGGACAGCGCGATTCGCTTTATCAACGAGTTGAAG GGGCTGGGCTGTCAGTTTTCCCTTGATGATTTCTGTTCGGGCATGTCGTCCTTTGCCTATCTCAAACACTTGCCTGTGGATTTTCTGAAAATCGATGGCA GTTTTGTAAAGGACATGCTCGACAATCCGATCAACAAGGCTATGGTCGAGGTCATCAACAATATTGGTCATGTGATGGGCAAACGCACCATTGCTGAGTA CGTAGAAACGCCGCAGATAGAGTTTGCGTTGCAGGAAATGGGCGTGGATTTTGCACAAGGGTATCTGATATCACGCCCTGAATTGTTCACTTGCGAGAGT CTGTACATTCAGCCCGTACGGCCTGACCCCCTGATGTTCGGCGCGCCAGGAACGCTACGTTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCAGTTGAAACCCTATAAGGAGATACCCAGTGATCGACACTTTCGAGAGAACCGGTCCGCTCATGGAAGCCAGCAGTTATCCGGCCTGGGCGCAGCAGTT GATCAAGGATTGCAGCGCTGCAAAGGCACGGGTGGTCGAGCACGAGTTGTACCAGCAGATGCGTGACGCGAAGCTGAGTCCGCAGATCATGCGCCATTAC CTGATCGGCGGTTGGCCGGTTGTCGAGCAGTTCGCGGTGTACATGGCCAAGAACCTCACCAAGACCCGCTTTGGTCGTCATCCTGGCGAAGACATGGCGC GCCGCTGGCTGATGTTCAATATTCGCGTCGAACTCAATCATGCTGACTACTGGGTGAACTGGTGTGCAGCGCACGATGTGACGCTTGAAGACCTCCACGA TCAACGGGTTGCGCCTGAGCTGCACGCACTGAGCCACTGGTGCTGGCAGACCAGCTCTTCGGACTCACTGGCTGTTGCGATGGCGGCCACCAACTATGCC
|
|
| Amino Acid Sequence |
>sensory box protein
MKQPWTFSKPRLLGIVWPFIAVALFQALLGCVSLYTMSAVRSYVAGESLWSKGQKDAIHYLSLYAITHDERDYLKYQNAFSVPQGGHALRKALDQPIPSM ADARAGIIQGGNHPDDANGIIWMYLNFHNFSFMKQAIHFWEVGDGYLIQLNELARHIHDRVGEGGVSAAEVNQWRVQINVINEGVTPAARAFSDALGEGS RFILNLLIAVNLVTAVLLILLALLRVRRLIVQRRVFADALQLEKERAQITLESIGDGVITIDVAGAIVYMNPAAEGLTHWKSTQASGLPLTALFNLLDEN DQKDTSTLVEQIVTGKLKGGSANSKLIQRLDGSTVSVALVGTPIYNEGVVSGAVLVLHDMTQERQYIADLSWQAAHDPLTGLVNRSEFEHRLQRVLDGID DQASSHCLMFLDLDQFKLVNDTGGHAAGDELLRQLCRALPQGLRDGDTLARLGGDEFGVLLVDCPADTALDIAEGLREIVQTLHFMWKGRPFMTTVSIGL VQLGDTPATLEGSLSAADMACYMAKERGRNRVQVYSVDDLTLSMRFGEMAWIQRLHMAMDENRFCLYAQEIASIKGEGDEVRHIEILLRLRDESGRMVVP DNFIPAAERYGLMTTLDRWVVHNVFKVIAQCQSDDRHQAPQALCAINLSGSSIGDDTFLEYLKQQFKAFAVSPGMICFEITETSAIADLDSAIRFINELK GLGCQFSLDDFCSGMSSFAYLKHLPVDFLKIDGSFVKDMLDNPINKAMVEVINNIGHVMGKRTIAEYVETPQIEFALQEMGVDFAQGYLISRPELFTCES LYIQPVRPDPLMFGAPGTLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|