Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3385 (fleR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCGACATGCTGGTGTTTGCCCGTGGCGAGTTGCCGCTGACGGATCGCCTGACGCCTGTTGCCTTGTTTCAGGCTTTGCAAAACGCTGCGGTCACCCATG TGCAGGGCGTACCGGTGCGTTGGCAGTGCGACAGTATTGAAGGCGAGTTGCTGTGCAATCGCGACACGTTGGTTGGTTCGTTGCTCAACCTGATTGAAAA CGCCGTCCAGGCCAGTGCTGGCCGGACACTGCTGAAAGTTCATGTGTACAGCCGCGGCAATGTGCTGCGCGTATGCTTCAGCGATAACGGCAGCGGCATG GACAAGGCTGCGCTGGCGCGTATCGGCGAGCCGTTTTTCACCACCAAGACCACCGGCACCGGGCTTGGTCTGGCTGTGGTGACGGCGGTGTCGCGTGCGC ATCAGGGCGGCGTGCATTATCTGTCGCGGGTCGGTCGTGGCACCTGTGCAATTGTCAGCCTGCCATTGATTCCGGCTTCCGGCTCGATGGGTAACAACTG
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| DNA Sequence for Gene |
>PSPPH_3385
|fleR
ATGTCGATCAACGTGCTGTTGGTCGAGGACGACCGTTCGCTGCGCGAGGCACTTGGGGAAACCCTGGAATTGGCTGGCTATGGATACCAGGCGGTCGGCT CTGCTGAAGAGGCGTTGGTCGCAGCCGAGGCGCAACCGTTCAGTCTGGTGATCAGCGACGTCAACATGCCGGGCATGGACGGTCATCAGTTGCTGAGCCT GTTGCGCAGTCGGCATCCGCAACTGCCGGTACTGCTGATGACTGCCCACGGTGCCGTTGATCGCGCGGTCGATGCCATGCGTCAGGGCGCGGCCGATTAT CTGGTCAAGCCTTTCGAGCCCAAGGCCCTGATTGCATTGGTTGCACGACATGCACTGGGTCGTCTGGAGCCTGCCGAGCGCGACGGGCCGATTGCTGTTG AACCCGCCAGTATCCAGTTATTGAACCTGGCCAGCCGTGTGGCGAAGAGCGACTCCACTGTGCTCATCTCCGGTGAGTCCGGCACAGGCAAGGAAGTGCT GGCGCGTTTCATTCATCAAAATTCTCCGCGTGCCGATAAGCCTTTTATTGCGATCAACTGCGCTGCGATTCCGGACAATATGCTGGAAGCGACGCTGTTC GGTCATGAAAAGGGCTCGTTTACCGGCGCCATTGCCGCGCAGGCCGGCAAGTTCGAGCAGGCTGACGGCGGGACAATCCTGCTTGACGAGATTTCCGAAA TGCCACTGGGGCTGCAGGCCAAACTGTTGCGTGTGTTGCAGGAGCGGGAAGTCGAGCGCGTGGGTGCGCGCAAGCCGATCATTCTGGATATTCGCGTTGT GGCTACTACCAACCGCGATCTGGCAGGGGAAGTGGCGGCGGGGCGCTTTCGCGAAGATCTGTTTTATCGCCTGTCGGTATTTCCACTGGCCTGGCAGGCG CTGCGTCAAAGGACTGCCGATATTCTGCCACTGGCCGAGCGGCTTCTGGCCAAGCACGTCAATAAAATGAAGCACGCGCCGGTTCGTCTTTCTGCCGAGG CGCAGCAGTGTCTGGTCAGCTACCCTTGGCCTGGCAATGTGCGTGAGCTGGATAACGCCGTGCAGCGAGCCTTGATTCTGCAGCAGGGCGGGGTGATACA GGCGCAGGATTTCTGTCTCTCCGGGCCGGTGACAAGTCTTCCAGCCGCTGCCGTGGTGGAGGCTGTGCCGTCTTTGCCTGTCACATCCTCGCCTGATAAT GCAGGTGCTGGTGGCAATGCGGAGTCTGTCGGTGCACTGGGTGATGACCTCAGGCGTCGCGAGTTTCAGATGATTATTGACACGCTGCGTGCGGAGCGCG GTCGTCGCAAGGAGGCCGCCGAGCGCCTGGGTATCAGCCCGCGTACCTTGCGTTACAAGCTGGCGCAGATGCGCGATGCCGGGATGGATGTGGAAGCCTA TCTGTTCGCTACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCGGTGGCGCTGATCGGTGGTTGTGATCACTGGTCACTGAATATTCGTATAAACGGCGCAAGCCGGAAATATCCGGATACCCCCATGAATACGGGAGGT CTGGAGTGATTTCATGTCGGGCAACATGGTATTCCCATTTGGTGTGGCAAATAGCCGCCATCTAGCTGGCACCGTTGTTGCTATGTCTTCTGTACCCGCT GAATCAGTGTCAAAAATTTGCGGGCCTTACGAGAGAAACGTCCATGAGCAAAGGTGTTGAATTTAATCGCTTGATGTTGGATATGCGGGCCATGCAGATG GATGCGATGTCTGCACCCAAGCCCGTGTCCGGCGCGCAGGAAGCCGGCGCCAGCAGCTTTGCCGACATGCTTGGCCAGGCCGTCAACAAGGTCGCGCAGA CCCAGCAGGCCTCCAGCCAGTTGGCCAATGCATTTGAAATCGGCAAGAGCGGCGTCGATCTGACCGACGTCATGATTTCGTCGCAGAAAGCCAGCGTGTC
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| Amino Acid Sequence |
>Fis family transcriptional regulator
MSINVLLVEDDRSLREALGETLELAGYGYQAVGSAEEALVAAEAQPFSLVISDVNMPGMDGHQLLSLLRSRHPQLPVLLMTAHGAVDRAVDAMRQGAADY LVKPFEPKALIALVARHALGRLEPAERDGPIAVEPASIQLLNLASRVAKSDSTVLISGESGTGKEVLARFIHQNSPRADKPFIAINCAAIPDNMLEATLF GHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQAKLLRVLQEREVERVGARKPIILDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWQA LRQRTADILPLAERLLAKHVNKMKHAPVRLSAEAQQCLVSYPWPGNVRELDNAVQRALILQQGGVIQAQDFCLSGPVTSLPAAAVVEAVPSLPVTSSPDN AGAGGNAESVGALGDDLRRREFQMIIDTLRAERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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