Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3274 (katB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTGTGGCCACATGATAGCGCGTCAACGCTTTCAAAACCGATAATGTCACTTTGCCGCGGGATAACTTAGTTGTAACTTATACGACGACCTCAGAAGACAA TATCAAAAAGCCAGCAATCTTGAATGTCACATTATTTAGTTGCACGATCGTTCCACACCGGGACGCCAGCACTTTATTATTGACGAACCCTAAAAATGAT AATGATTACTATTAACTCTAGACGGCGTGATTAAACGTGCCTTTGATTAATACCAACATTTAATAAAAATTCCTTTATTTTCATGGTTATGCATAACTAA AACCATGATTTTTTATACGTTCACCTGTAGCCCGCCTTCCTCATATCCAAGGAAATTATTCAACTAATTGTGAAAGTTTTTACTCGGTTCCTCTCCCCTC TCAGTATTTATCTTAATCACCCCGATATATTTTTATAATCACCGCCCTGCCCTCACGCGCCTAAGATAAACCGGCCTACTAAAAATATGAGGGATTCAAA
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| DNA Sequence for Gene |
>PSPPH_3274
|katB
ATGCCGTTATTAAACTGGTCCAGACACATGGTGTGTTTGACTGCAGTCGGTCTCGTTACGGTTCCGACCGCCTATGCAGCAGACACCCTGACCCGCGACA ATGGTGCCGTCGTCGGCGACAATCAGAACTCTCAGACTGCAGGCGCCCAAGGGCCTGTCCTGCTGCAAGATGTGCAGCTGTTGCAAAAGCTGCAGCGCTT TGATCGCGAGCGTATTCCGGAGCGCGTGGTCCACGCTCGCGGCACGGGTGTCAAAGGTGAGTTCACCGCATCGGCCGATATCAGCGATCTGAGCAAGGCC ACGGTGTTCAAATCGGGCGAAAAAACCCCGGTCTTCGTGCGCTTTTCCTCCGTTGTCCATGGCAACCACTCGCCTGAAGCCCTGCGCGACCCACACGGCT TCGCCACCAAGTTCTACACGGCAGACGGTAACTGGGACCTGGTAGGCAACAACTTTCCAACCTTCTTCATCCGTGACGCCATCAAGTTCCCGGACATGGT CCACGCCTTCAAGCCTGACCCGCGTACCAACCTGGACAACGATTCGCGTCGCTTTGACTTCTTCTCGCATGTTCCAGAAGCCACACGTACGCTGACACTG CTGTATTCAAATGAGGGTACACCTGCAGGCTATCGCTTCATGGACGGCAACGGCGTACACGCCTACAAACTGGTGAATGCCAAAGGCGAAGTGCACTACG TCAAGTTCCACTGGAAGACCCTGCAAGGCATCAAGAACCTTGATCCGAAAGAAGTCGCTCAGGTCCAGTCCAAGGACTACAGCCATCTGACCAACGATCT GGTCGGTGCCATCAAAAAAGGCGACTTCCCGAAATGGGACTTGTACGTTCAGGTCCTGAAGCCTGAAGAGCTGTCGAAATTCGACTTCGACCCTCTGGAC GCCACCAAGATCTGGCCTGATGTCCCTGAGAAGAAAATCGGTCAGATGGTCTTGAACAAGAACGTCGACAACTTCTTCCAGGAAACCGAACAGGTCGCCA TGGCCCCGGCTAACCTGGTTCCTGGTATCGAGCCTTCCGAGGACCGTCTGCTGCAAGGCCGTGTGTTCTCCTACGCCGACACCCAGATGTATCGCCTGGG CGCGAATGGTCTGAGCCTGCCGGTCAACCAGCCCAAGGTTGCGGTGAACAATGGTAATCAGGACGGTGCTCTGAATACCGGTCACACCACCAGCGGCGTC AACTATGAGCCGAGCCGTCTGGAGCCACGTCCAGCCGACGAAAAAGCGCGCTACAGCGAACTGCCGATCAGCGGCACCACCCAGCAGGCGAAGATCACGC GTGAGCAGAACTTCAAGCAGGCGGGTGATCTGTATCGCTCCTACAGCCCTAAAGAGAAGACCGACCTGGTACAGAGTTTTGGCGAGTCGCTGGCTGACAC CGACACCGAAAGCAAGAACATTATGCTGTCGTTCCTGTACAAGGCAGATCCGGACTACGGCACTCGGGTAACCGAAGTCGCCAAGGGCGATCTGAGCAAG GTCAAGTCGCTGGCTGCAAGCCTCAAAGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGATCTGATGTCCCGCTCCGGCGTTTACGACGCCGGGGCGGTTCCAGCCAGGAGAACGCCTGTGAAAAATCTGATCTATGCCTTGCTGCTGTTTGCTGCA GCCGCAAACGCAACCCCACCCGCCCCTGTACCCGCTTCCGAACTGACCGCTGAACAGACCGCCAGCCAGTTGCGCACGCTGTTTTTCGACGCGTCCCGTG AAGGCAACAACCCGATGCTGGACACCTTCATCGAAGCCCATTACGACCTCAACGTGCGTGACGAACAGGGCTATACCGGCCTTATTCTGGCCGCCTATCA CGGCCATGAAGATTCGGTGGAACGCCTGATCAATGCCGGTGCTGACCCTTGCGCCAAGGACAATCGCGGCAACACTGCACTGATGGGCGCAATTTTCAAG GGTGAATTGAGCATCGCCAAGCGCCTGGTTCAGGCCGATTGCGGCCCAAACCTGACCAACAATGCCGGGCAGACGGCGGCCATGTACGCGGCGCTGTTCA
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| Amino Acid Sequence |
>catalase KatB
MPLLNWSRHMVCLTAVGLVTVPTAYAADTLTRDNGAVVGDNQNSQTAGAQGPVLLQDVQLLQKLQRFDRERIPERVVHARGTGVKGEFTASADISDLSKA TVFKSGEKTPVFVRFSSVVHGNHSPEALRDPHGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRTNLDNDSRRFDFFSHVPEATRTLTL LYSNEGTPAGYRFMDGNGVHAYKLVNAKGEVHYVKFHWKTLQGIKNLDPKEVAQVQSKDYSHLTNDLVGAIKKGDFPKWDLYVQVLKPEELSKFDFDPLD ATKIWPDVPEKKIGQMVLNKNVDNFFQETEQVAMAPANLVPGIEPSEDRLLQGRVFSYADTQMYRLGANGLSLPVNQPKVAVNNGNQDGALNTGHTTSGV NYEPSRLEPRPADEKARYSELPISGTTQQAKITREQNFKQAGDLYRSYSPKEKTDLVQSFGESLADTDTESKNIMLSFLYKADPDYGTRVTEVAKGDLSK VKSLAASLKD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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