Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3244

Gene Feature Overview

Strain	Pseudomonas savastanoi pv. phaseolicola 1448A GCF_000012205.1|latest
Locus Tag	PSPPH_3244
Name
Replicon	chromosome
Genomic location	3759301 - 3759915 (+ strand)

Cross-References

RefSeq	YP_275404.1
GI	71738164
Entrez	3560598
INSDC	AAZ37928.1
NCBI Locus Tag	PSPPH_3244
UniParc	UPI0000575B7D
UniProtKB Acc	Q48GS9
UniProtKB ID	Q48GS9_PSE14
UniRef100	UniRef100_Q48GS9
UniRef50	UniRef50_Q87Z81
UniRef90	UniRef90_Q87Z81

Product

Feature Type	CDS
Coding Frame	1
Product Name	TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7)	0.93
Kyte-Doolittle Hydrophobicity Value	-0.275
Molecular Weight (kDa)	23.3
Isoelectric Point (pI)	7.68

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
3CDL	TRANSCRIPTION REGULATOR	02/27/08	Crystal structure of a TetR family transcriptional regulator from Pseudomonas syringae pv. tomato str. DC3000	Pseudomonas syringae pv. tomato	2.36	X-RAY DIFFRACTION	91.9

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 335 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000241 (6008 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPPH_3244 Search term: TetR family transcriptional regulator

Human Homologs

References