Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3157 (dxnH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3157
Name
dxnH
Replicon chromosome
Genomic location 3660312 - 3660968 (+ strand)

Cross-References

RefSeq YP_275321.1
GI 71734536
EC Number 2.8.3.6
Entrez 3556848
INSDC AAZ34300.1
NCBI Locus Tag PSPPH_3157
UniParc UPI0000575B2D
UniProtKB Acc Q48H12
UniProtKB ID Q48H12_PSE14
UniRef100 UniRef100_Q48H12
UniRef50 UniRef50_P42316
UniRef90 UniRef90_Q48H12

Product

Feature Type CDS
Coding Frame 1
Product Name
3-oxoadipate CoA-succinyl transferase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -9.58
Kyte-Doolittle Hydrophobicity Value 0.253
Molecular Weight (kDa) 23.2
Isoelectric Point (pI) 4.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 273 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003435 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3157
Search term: dxnH

Human Homologs

Ensembl 110, assembly GRCh38.p14
3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527]
E-value: 1.2e-55
Percent Identity: 52.2
Ensembl 110, assembly GRCh38.p14
3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527]
E-value: 1.2e-55
Percent Identity: 52.2

References

No references are associated with this feature.