Strain | Pseudomonas aeruginosa strain AZPAE14934 AZPAE14934_contig_7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCGACAACGACGACTTCGCCGTCTTCGAGTCGGGCGCGATCCTCATCTACCTCGCCGAGAAGACCGGGCAACTGATGCCCGCCGACGTCAAGGGCCGCT CGCGGGTGATCCAGTGGCTGATGTTCCAGATGGGCGGGGTCGGCCCGATGCAGGGGCAGGCCAACGTGTTCTTCCGTTATTTCCCGGAGAAGTTGCAGGG CGCCATCGACCGCTACCAGCATGAGACCCGGCGCCTCTACGAAGTTCTCGACGGGCGCCTGGGCGAGGCCGAGTACCTCGCCGGCGACTACAGCATTGCC GATATCGCCACCTATCCCTGGGTGCGCATCCACGACTGGTCCGGTGTCGCCGTCGACGGGCTGGACAACCTGCAGCGCTGGATCGCCGCCATCGAGGCGC GTCCCGCGGTGCAGCGCGGACTGCTGGTGCCGCGGCGGGAGAAGGAGGGCGACGACGCCATCCGTACCGCCCAGTCGATGCTGACCCGTTGAGGGCCGGT
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DNA Sequence for Gene |
>NS50_RS10170
ATGCGAGGGTTCCTGTTGCTATCCCTGGGCGTTTTCAGCTTTTCGGCGCTGGCCGCCGACCTTCCCGGCAGCCATGACCTGGACATCCTGCCGCGCTTCC CGCGCGCCGAGATCGTCGACTTCCGTCAGGCGCCGAGTGAGGAACGGATCTACCCGCTAGGGGCGATCAGTCGCATCAGCGGTCGCCTGCGCATGGAGGG CGAGGTGCGCGCCGAAGGCGAGCTGACCGCACTGACCTACCGCTTGCCGCCCGAGCACAGCAGCCAGGAGGCGTTCGCCGCGGCGCGCACCGCGCTGCTC AAGGCCGACGCCACGCCGTTGTTCTGGTGCGAGCGACGCGACTGCGGCTCCAGCAGCCTGCTGGCCAACGCCGTGTTCGGCAATGCCAAGCTGTACGGCC CGGACGAGCAGCAGGCCTACCTGCTGGTGCGTCTGGCGGCGCCGCAGGAGAACAGCCTGGTGGCGGTCTACTCGATCACCCGTGGCAATCGCCGCGCCTA CCTGCAGGCCGAGGAACTCAAGGCCGATGCGCCGCTGGCGGAACTGCTGCCGAGCCCGGCGACCCTGCTGCGCCTGCTCAAGGCCAACGGCGAACTGACC CTCAGCCATGTGCCGGCGGAGCCGGCCGGCTCCTGGTTGGAGCTGCTGGTGCGGACCCTGCGCCTGGATACCGGGGTGCGGGTCGAGCTGTCCGGCAAGC ACGCCCAGGAGTGGCGCGACGCCCTGCGCGGGCAGGGCGTGCTGAACAGCCGCATGGAGCTGGGCCAGTCGGAGGTCGAGGGCCTGCACCTCAACTGGCT GCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGCGTTCGCCCGGGCCTGCGGGCCCGGGCGATGGCGAAAATGCCTTCGGCAAGGCCGCCCGCCAGAGTAGACTGCCTTTCCCCCGCGCCCCACGCTCCG GCTGGAAACGGCGCACGCCGAGCGCTGTCTATCGGTGTATCCCCCTTTGAGGAAGGCCTGCCTTGATGTTCGATAACGATCGGCTGTTGCTTCGCGTGCT GCTGTTCGGTCTGCTCGGTGCCAGTCTCTGGGTGCTGGCGCCATTCTGGTCGGCGCTGTTCTGGGCCGCGGTGCTGGCTTTCGCCAGTTGGCCGCTGATG CGCATGCTCACGCGCCTGCTCGGTGGCCGCGAGTCGCTGGCGGCGGGCCTGCTGACCCTGGGCTGGATCGTCCTGGTGGCATTGCCGCTGATCTGGCTCG GCTTCGGCCTGGCGGACAACGTTCGCTCGCTGATGGAGCTGCTGAAGAATCTCCAGGTCGAGGGCCTGCCGCCGCCGCCTTCGTGGATGGCCGGCGTACC
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Amino Acid Sequence |
>hypothetical protein
MRGFLLLSLGVFSFSALAADLPGSHDLDILPRFPRAEIVDFRQAPSEERIYPLGAISRISGRLRMEGEVRAEGELTALTYRLPPEHSSQEAFAAARTALL KADATPLFWCERRDCGSSSLLANAVFGNAKLYGPDEQQAYLLVRLAAPQENSLVAVYSITRGNRRAYLQAEELKADAPLAELLPSPATLLRLLKANGELT LSHVPAEPAGSWLELLVRTLRLDTGVRVELSGKHAQEWRDALRGQGVLNSRMELGQSEVEGLHLNWLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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