Pseudomonas aeruginosa AZPAE14934, NS50_RS08825
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14934 AZPAE14934_contig_6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCACGGGTCACCCCGGCGGCCCTGGCGATCTGTTCCAGGCTGGTATGGGACACGCCCTTTTCCAGGAACAGTTCCTCGGCGGCCAGGAGGATGGCCGTA CGGGTTTTTTCAGAATCTTCCTTTGTGCGTCGCATGCTGTGCTGGGTAGTCGAATCGGTCTCGGCAACGGGGCGGGGAGTGTACCGATTTTAGCCGCGCT CGGGCGGACTCGAAGTATTTCGACACCACCTTTGTCTAATGCTGCTCATTCATGAGTCGTGGATTCCGCGGTTCCACGGTCTCCGGCCATGATCGGCGGG CGTCTTCGGTGTTATGCTGCGCGCTGCTTTTTCGGCGACTCCCCGGCTGTCCGTAGCATCTTCCCGCCAGTACCGGCCTTCAGGCCTGGAGCCGCCCGCC CTCACAGACGATTCAATGATAGGCGTCGTCGTCCCGCTTGCCGGGAGCCGCGCAGGGAAGTGCCTTGCCTGCCACCGACGCGCCCCGTGCCGAGCGATCC
|
|
| DNA Sequence for Gene |
>NS50_RS08825
ATGAACCTGCGCATCCTGCTGATACTGGGAGCCCTGAGCGCCTTCGGGCCACTGGCCATCGATTTCTACCTGCCGAGCTTCCCGACCCTGGCCAAGGCCT TCGCCACCGACGTCGAGCACGTCCAGCTGAGCCTGGCCGCCTACTTCGCCGGCCTGTCCATCGGCCAGTTGCTCTACGGCCCGGTGGCCGACCGCTATGG CCGGCGCCTGCCGCTGCTGGTGGGGGTGAGTATCTTCACCCTGGCCTCGGCCGCCTGCGCCCTGGCGCCGAGCCTGGAGTGGCTGATCGCCGCGCGCTTC GTCCAGGCCCTCGGCGGCTGCGCCGGGATGGTCATCTCGCGGGCAGTGGTGCGTGACCTGTGCGATCCGATCGGCGCCGCCAAGGCGTTTTCCCAGTTGA TGCTGGTGATGGGCCTGGCGCCGATCCTCGCCCCCGTGGCCGGCGGCCTGCTGCTGGACTGGCAGGGCTGGCAATCGATCTTCGTCTGCCTGACCCTGTT CGCCGCCCTGGCCGGCCTCGGCGTGGCGTTGTGGCTGCCGGAAACCATCCCGGCCGACGGCGAGCGACCGCCGCTGTCCGGCGCGCTGGGGCAGTACCGG CGGCTGTTCGCCGACCGCCTGTTTCTCGCCTATGGCCTTTCCGGCGGGGTGGCGATGGCCGGGATGTTCGCCTACATCGCCGGTTCGCCCTACGTGTTCA TCCAGCTCTACGGGATTCCCGCCGAGCACTATGGCTGGCTGTTCGGCAGCAATGCCGCGGGCTTCATCGTCATGGCACAGGTCAACGCGCGGCTGCTGCG CTATCGCGGGCCGGCGTTCTGGCTGCGGCGGATCATCTGGGGCTACCTGGCGTGCGGCCTGGCCCTGCTGGGCATCGCTTCGCTGCAACCGGCCACGCTG TGGCCGCTGCTGGTTCCGCTGTTCGGATGCGTGGCCAGCCTCGGCTGCATCATTCCCAACGCTTCCGCCTGCGCCATGGCCGGACAGGGACAGCACGCCG GCAGCGCCTCGGCGCTGATGGGCAGCCTGCAGTTCAGCGTGGCGGCGGGCGCTTCGGCGCTGGTCGGCGTGCTCCACGACGGCACGGCGATCCCCATGAC TCTGGTGATCGCCGTCTGCGGCGCGGTCGCGACCCTGCTCGCCTGGCAGACCGGGCGCCTGGAGCGCCAGGCCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGCGGATCAGGCCGTTCGCTGTTTCAGTTCGGGCAGCACATGGGGCGCGCGCAGGCGCGCCTCGAGGCGGTCGACGAAACGCCGGGCCTCGCTTTCGCT ACGGAAGTTGACGGCCTGCTGGTCGAGGCAGACTTGCCAGCATTGGCCTTTCGGGGTTTGCGACGGGCGGACGAGGATGTTCATGGCGATTCATCCATCG GGGCTGGAAAGGGAGCTTCAGTCTAGTCCTGTCGGCCCGGAAAACACTGACCGGGATCAGTTTGCCGACAACTGGTCGCCGCTTCGTTTACAGCCCCGCC GCAGAGCCCTTCAGGCTCCTCCCTCGCCCTGCCTTACCCGCTGCCGGTAGGCGCGCGGCGACAAACCCATGACCTTGCTGAACAGGCGCGAGAAGTAGTA GCTGTCGTCGTAGCCGACCGCCTGGCCGACCCGGGCCACGCTCTGGTCGCTGCTGTCCAGCAACTGGCAGGCGTACTCGATCTTCAGGTGCAGGAAGTGC
|
|
| Amino Acid Sequence |
>major facilitator transporter
MNLRILLILGALSAFGPLAIDFYLPSFPTLAKAFATDVEHVQLSLAAYFAGLSIGQLLYGPVADRYGRRLPLLVGVSIFTLASAACALAPSLEWLIAARF VQALGGCAGMVISRAVVRDLCDPIGAAKAFSQLMLVMGLAPILAPVAGGLLLDWQGWQSIFVCLTLFAALAGLGVALWLPETIPADGERPPLSGALGQYR RLFADRLFLAYGLSGGVAMAGMFAYIAGSPYVFIQLYGIPAEHYGWLFGSNAAGFIVMAQVNARLLRYRGPAFWLRRIIWGYLACGLALLGIASLQPATL WPLLVPLFGCVASLGCIIPNASACAMAGQGQHAGSASALMGSLQFSVAAGASALVGVLHDGTAIPMTLVIAVCGAVATLLAWQTGRLERQAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|