Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2804 (arnA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GATGCAATGCTGGCCTGCCGGGAGCGCAGCACCTTCATTCCGATTTTGGCCAACAGTTTTGCGCGGCACACGACGGAGGTATTGGTCGATCACGCTGAAC GTGAACATGGCGACTCGAAATACAGCCCCATGCGCCTGGTCAACCTCATGTTTGACCTGATCACCTGCATGACCACTACGCCCTTGCGCCTGCTCAGCAT TATCGGCTTCAGCATGGCGCTGCTCGGTGTGCTGTTCGCTGCGTTACTGATCATTCTGCGTCTGATCTTCGGTGCGCCATGGGCCGGTGACGGCACGTTC GTGCTGTTTGCGGTGTTGTTCGTATTCACCGGAGGGCAGTTCATCGGTATGGGATTACTGGGTGAATACCTGGGCCGAATGTACAGCGATGTCCGCGCGC GCCCGCGCTTCTTCATTGAAAAAGTCGTGCGCAGCTCGTCCGAAGTTGTCAGCGAAAGCGTTGATTCCTCTGTAACTCCCTATATGAACAAGGTTGCGCC
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| DNA Sequence for Gene |
>PSPPH_2804
|arnA
ATGAGCCCTAAAGCTGTCGTTTTCGCCTATCACGATATTGGCTGTGTCGGCCTGCAAGCGCTGCTGGGCGCAGGTTATGAAATTGCTGCAGTTTTCACTC ACGCCGACGACCCCAAGGAAAAAACCTTCTTCGGTTCCGTGGCTCAGCTGTGCGCGCGACATGGCATTCCCGTACATGCTCCTGAGGACCCTAATCATCC TTTGTGGGTAGAACGCATCGATAAACTGGCCCCTGACTTCATCTTTTCCTTCTATTACCGCCAACTTCTCGGTGATCCGTTACTGGCCTGCGCGAAAAAA GGCGCATTGAATCTGCATGGCTCGCTGTTACCACGCTATCGCGGGCGAGCGCCGGCGAACTGGGTGCTGGTCAATGGCGAAAGCGAGACCGGCGTGACCT TGCATCAGATGGTCAAGCGCGCCGATGCAGGGCCGATAGTCGCTCAGCAACGCGTCTCGATAAGTTCCACCGATACAGCCTTGACGCTCCACGGCAAACT GCGTGAAGCCGCCGCTGACCTGCTTAGTGAAACGCTACCGCTGCTTGCCCTCGGGCAACTTTCAGGCACGCCGCAGGACGAAACCCGTGCAAGCTGTTTC GGTCGCCGCACCCCGGCCGACGGTTTGATCGACTGGTCGCTTCCGGCCACGCAACTGTACAACCTGATACGGGCAGTCACGCAGCCCTACCCTGGCGCAT TTTGCGCGGTAGGCGAAAACAAGTTGATTGTCTGGGCCGCCAGTGCCGAAGCAGGCAACAACGGCGAAGCACCCGGCACGGTCATCAGTCACGACCCATT GCGTATCGCCTGCGGTGAGGGTTCGCTGGTGATCAACGCAGGGCAGCGCGGCGACAACGGCTTGTACCTCAGTGGGGCACAACTGGCTCGCGAGTTCGGG CTGGTGGAAGGCTCGCAACTGCTCGATACAGAAAAGCGCCGCCCGGCCCGCCGTACCCGCGTGCTGATCCTAGGCGTCAACGGTTTCATCGGCAATCATC TGTCAGAACGCCTGTTGCAGGACGATCGTTACGACATCTACGGCATGGACATCGGTTCAGACGCCATTGAGCGCCTGCGAACCAAGCCGAACTTTCACTT TATCGAAGGCGACATCAGCATCCACACCGAGTGGATCGAGTATCACATCAAGAAATGCGATGTGGTGCTGCCATTGGTGGCCATCGCTACACCGATTGAA TACACCCGCAACCCGTTGCGGGTGTTTGAGCTGGATTTCGAAGAAAACCTGAAGATCGTCCGTTACTGCGTGAAGTACAACAAGCGGGTGATCTTCCCGT CAACGTCCGAAGTCTATGGTATGTGCCAGGACGCAAGCTTCAACGAAGACACATCGAACCTTATCGTTGGCCCGATCAACAAGCAGCGCTGGATCTACTC GGTGTCCAAGCAACTGCTGGACCGCGTGATCTGGGCCTATGGTCAGAAAGGCCTGCAATTCACCCTGTTTCGCCCGTTCAACTGGATGGGCCCACGCCTG GACCGACTGGACTCGGCGCGTATCGGCAGTTCTCGGGCCATCACCCAACTGATTTTGCACTTGGTGGAAGGTACGCCGATTCGGCTGGTGGACGGCGGGG CCCAGAAGCGCTGTTTCACCGATGTCGCCGACGGTATCGAGGCGCTGGCGCGGATTATCGAAAATCGTGATGGGTGCTGTAATGGTCAGATCATCAACAT CGGTAACCCCGACAATGAAGCCAGCATTCGCCAATTGGGTGAAGAGCTGCTGCGCCAGTTCGAAGCGCACCCGTTGCGCGGCAACTTCCCGCCATTCGCA GGCTTTCGCGAAGTAGAAAGCCAGTCCTTTTATGGCAAGGGTTATCAGGATGTCAGCCATCGCAAACCGAGTATCGACAACGCCCGACAGTTGATTGGCT GGACACCAGGTATCGAGCTGAGCGAAACGATTGGCAAAACCCTGGACTTCTTCCTTCGCGAAGCCATGGCTGAAAAGGCGGATATGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCAGGCAGGCTTAAGAATCGATGTCGACACATATAGGGGCACCCGTGAAGGCGTGCCGAGGTTGCTGGACATACTCGATGAAGCTCAGGTCAAGGCGAC GTTCTTTTTCAGCGTCGGCCCCGACAACATGGGACGTCACCTGTGGCGTCTCGCACGGCCCACGTTTTTCTGGAAGATGCTTCGCTCCAGAGCAGCAAGC CTGTATGGCTGGGATATTCTGCTGGCGGGTACGGCGTGGCCGGGCAAGCCGATAGGACGTGACCTTGGCCCGTTGATGCGTCGCGCTCTGGATGCAGGCC ACGAGGTCGGCCTGCATGCGTGGGATCATCATGGCTGGCAAGCCAATGCCGGACGCTGGAACGATCGCCAGTTGACCGCACAGATACACCGTGGGGTCGA CTGTCTGAGCGACATTTTAGGCAACCCGGTGATCTGCTCCGCAGCAGCGGGCTGGCGTGCCGACCAGCATGTCGTGCAGGCCAAGCAGGCGTTTGGCTTC
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| Amino Acid Sequence |
>bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase
MSPKAVVFAYHDIGCVGLQALLGAGYEIAAVFTHADDPKEKTFFGSVAQLCARHGIPVHAPEDPNHPLWVERIDKLAPDFIFSFYYRQLLGDPLLACAKK GALNLHGSLLPRYRGRAPANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISSTDTALTLHGKLREAAADLLSETLPLLALGQLSGTPQDETRASCF GRRTPADGLIDWSLPATQLYNLIRAVTQPYPGAFCAVGENKLIVWAASAEAGNNGEAPGTVISHDPLRIACGEGSLVINAGQRGDNGLYLSGAQLAREFG LVEGSQLLDTEKRRPARRTRVLILGVNGFIGNHLSERLLQDDRYDIYGMDIGSDAIERLRTKPNFHFIEGDISIHTEWIEYHIKKCDVVLPLVAIATPIE YTRNPLRVFELDFEENLKIVRYCVKYNKRVIFPSTSEVYGMCQDASFNEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGQKGLQFTLFRPFNWMGPRL DRLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVADGIEALARIIENRDGCCNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRGNFPPFA GFREVESQSFYGKGYQDVSHRKPSIDNARQLIGWTPGIELSETIGKTLDFFLREAMAEKADMR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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