Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2760 (cbrD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2760
Name
cbrD
Replicon chromosome
Genomic location 3196864 - 3197655 (+ strand)

Cross-References

RefSeq YP_274949.1
GI 71735378
Entrez 3557717
INSDC AAZ35142.1
NCBI Locus Tag PSPPH_2760
UniParc UPI00005759C5
UniProtKB Acc Q48I32
UniProtKB ID Q48I32_PSE14
UniRef100 UniRef100_Q48I32
UniRef50 UniRef50_O34510
UniRef90 UniRef90_D7I0N7

Product

Feature Type CDS
Coding Frame 1
Product Name
achromobactin transport ATP-binding protein CbrD
Synonyms
Evidence for Translation
Charge (pH 7) -5.68
Kyte-Doolittle Hydrophobicity Value 0.020
Molecular Weight (kDa) 29.0
Isoelectric Point (pI) 5.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001543 (890 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2760
Search term: cbrD

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 4.1e-13
Percent Identity: 28.2
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 4.1e-13
Percent Identity: 28.2
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 4.1e-13
Percent Identity: 28.2

References

No references are associated with this feature.