Strain | Pseudomonas aeruginosa strain AZPAE14934 AZPAE14934_contig_31, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTTTCGCGAGCGCTGGCATGGCTTCCTGCTGCGCGTGCCGCTGGTCGGTCGGCTGGTGCGTTCCACCGACACCGCGCGCTTCGCCTCGACCCTGGCGATC CTCACCCGCAGCGGCGTGCCGCTGGTGGAGGCGCTGGCGATCGCCGCCGAGGTGATCGCCAACCGGATCATCCGCAACGAAGTGGTCAAGGCCGCGCAGA AGGTCCGCGAGGGCGCTAGCCTGACCCGCTCGCTGGAAGCCACCGGACAGTTCCCGCCGATGATGCTGCACATGATCGCCAGCGGCGAGCGCTCCGGCGA GCTGGACCAGATGCTGGCGCGCACCGCGCGCAACCAGGAGAACGACCTGGCGGCGCAGATCGGCCTGATGGTCGGCCTGTTCGAACCGTTCATGCTGATA TTCATGGGCGCGGTGGTGCTGGTCATCGTCCTTGCCATTCTTCTTCCGATCCTTTCTCTCAACCAACTCGTGGGGTAATCGCGTGAATCAGAGCCGCCCA
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DNA Sequence for Gene |
>NS50_RS27585
TTGCAGCGTCGCCAACAGTCGGGCTTCACCCTGATCGAAATCATGGTCGTGGTGGTCATCCTCGGCATCCTCGCCGCCCTGGTGGTGCCGCAGGTGATGA GCCGTCCCGACCAGGCCAAGGTCACCGTGGCCAAGGGCGACATCAAGGCCATCGCTGCCGCGCTGGACATGTACAAGCTGGACAACTTCGCCTATCCGAG CACCCAGCAGGGCCTCGAGGCGCTGGTGAAGAAGCCCACCGGCAATCCGCAGCCGAAGAACTGGAACAAGGACGGCTACCTGAAGAAGCTGCCGGTCGAT CCGTGGGGCAATCCCTACCAGTACCTGGCGCCGGGCACCAAGGGCCCGTTCGACCTGTATTCGCTGGGCGCCGACGGCAAGGAAGGCGGCAGCGACAACG ACGCCGACATCGGCAACTGGGACAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGACATGCGGGCTTCGCGCGGCTTCACCCTCATCGAGCTGATGGTGGTGATGGTCATCATCAGCGTGCTGATCGGCCTGGCGGTGCTCAGCACCGGCT TCGCCAGCACCTCGCGGGAGCTGGACAGCGAGGCCGAGCGGCTCGCCGGGCTGATCGGCGTGCTGACCGACGAGGCCGTGCTGGACAACCGCGAGTACGG CCTGCGCCTGGAGCGCGATGCCTACCAGGTACTGCGCTACGACGAAGCGAAGGCGCGCTGGTTGCCGGTGGCGCGCGACAGCCACCGCCTGCCGGAGTGG GCGGAGCTGACCTTCGAGCTGGACGGCCAGCCGCTGGTGCTGGCCGGCAGCAAGGGCGAGAAGGAGCAGAAGAAAGGCACCGACCAGCCGCAATTGCTGA TCCTCTCCAGTGGCGAACTCAGTCCGTTCCGCCTGCGCCTGGCCGAGCGCGGACCCGAGGGGCGGGCGTTGTCGCTGAGCAGCGACGGTTTCCGCCTGCC
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Amino Acid Sequence |
>secretion system protein G
MQRRQQSGFTLIEIMVVVVILGILAALVVPQVMSRPDQAKVTVAKGDIKAIAAALDMYKLDNFAYPSTQQGLEALVKKPTGNPQPKNWNKDGYLKKLPVD PWGNPYQYLAPGTKGPFDLYSLGADGKEGGSDNDADIGNWDN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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