Pseudomonas aeruginosa AZPAE14934, NS50_RS27525 (fadH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14934 AZPAE14934_contig_31, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGCTCGGGGAACACCACCACCGTGCGCTCGTTGAGCAGGCCCTGGCGGCGGGCATTTTCCAGGTAGGCGTGGAATTTCAGTTGCAACCGTTCGGCGCT CTGGTAGTCCGGCGTGAACAGTTCCGGCTGGACCGCCAGCAGGTTGCCGCGCTCGCCGGGCTGGCCCTGGACCACGCTGACCTGGCTGCGCAGGTCGGAC AGGTAGTGGCCTACCGGGCGGCGTTCGGCCCAGCCGGCGTAGGCGGCGAAGAGGGTGATGAGGATCAGGAAGATCAGCTTGCGCATGCGGGTCTCCAAGG CAGCCCACAGGTTAGGGGAGTGGCGTCGGCTTGCCAAGCATCCCTGTGCATTCCGATCAGTAACTTGTCATTTAGGATCATTGAGCGCTCCGGTGGCGCT CCTTAGAGTCGTCGCCATACCGACCGCTGCCCGTCCCGCGCATTGCGCCCGAGGCCGCGGCATATCCGTGAACGCGTTTCGCCCGATGTGGAGACCCCCG
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| DNA Sequence for Gene |
>NS50_RS27525
|fadH
ATGACCGCCGCCGTTCCCTATCCGCACCTGCTCGCCCCGTTGGACCTCGGCTTCACCACCCTGCGCAACCGCACCCTGATGGGGTCCATGCACACTGGCC TGGAAGAGAAGCCGCAGGGCTTCGAGCGCATGGCGGCGTACTTCGCCGAACGCGCCCGTGGTGGCGTCGGCCTGATGGTCACCGGCGGCATCGGCCCGAA CGAGGAGGGCGGCGTGTATTCCGGCGCGGCCAAGCTGAGCACGCCGGAAGAGGCGGAGAAGCACAGGATCGTGACCCAGGCGGTGCATGAGGCGGGTGGC AAGATCTGCATGCAGATCCTGCATGCCGGCCGCTACGCCTACAGCCCGAAGCAGGTGGCGCCGAGCGCGATCCAGGCGCCGATCAATCCGTTCAAGCCCA AGGAACTCGACGAGGAAGGCATCGAGAAGCAGATCGCCGACTTCGTCAACTGCGCCAGCCTGGCCCAGGTCGCCGGCTACGACGGCGTCGAGATCATGGG ATCGGAAGGCTACTTCATCAACCAGTTCCTCGTGCAGCACACCAACCAGCGCACCGACCGCTGGGGCGGCAGCTACGAGAACCGCATGCGCCTGCCGGTG GAGATCGTCCGCCGGGTGCGCGAGGCGGTGGGGCCGAACTTCATCATCATCTATCGCCTGTCCATGCTCGACCTGGTCGAGGGCGGCAGCAGCTGGGACG AGATCGTGCTGCTGGCGAAGGCCGTCGAGAAGGCCGGCGCGACCCTGATCAACACCGGCATCGGCTGGCACGAGGCGCGTATCCCGACCATCGCCACCAA GGTACCGCGCGCGGCCTTCACCAAGGTCACCGCCAAGCTGCGCGGCGAGGTCGGCATCCCGCTGATCACCACCAACCGCATCAACACTCCCGAGGTGGCG GAGAAGGTCCTGGCCGAGGGCGATGCCGACATGGTCTCCATGGCCCGGCCGTTCCTCGCCGACCCCGATTTCGTCAACAAGGCCGCCGCCGGCCACGCCG AACGGATCAACACCTGTATCGGCTGCAACCAGGCCTGCCTCGACCACACCTTCGGCGGCAAGCTGACCAGTTGCCTGGTCAACCCGCGCGCCTGCCACGA AACCGAGCTGAACTACATCCCCACCACCAGACCGAAGAAGATCGCCGTGGTCGGCGCCGGCCCGGCCGGCCTGGCCGCCGCCACCGTGGCCGCCGAGCGT GGGCACCGGGTCAGCCTGTTCGACGCCGCCGGCGAGATCGGCGGGCAGTTCAACGTGGCCAAGCGGGTTCCCGGCAAGGAAGAGTTCCACGAGACCCTGC GCTACTTCCGCAACAAGCTGGAGAGCACCGGTGTCGAACTGCACCTGAACCGCCGGGTCGACGTGGACGACCTGGTCGCGGGCGGCTACGACGAGATCGT CCTCGCCACCGGCATCGTTCCGCGCACACCGGCGATCCCCGGCATCGAGCATCCGAAGGTGATCAGCTACCTGGATGCGATCCTCGAGCGCAAGCCGGTG GGTGGCAAGGTGGCGGTGATCGGCGCCGGCGGCATCGGCTTCGACGTCTCCGAATTCATCACCCATGCCGGTCCGTCCACCAGCCTGGAGCGCGAGGCGT TCTGGAAGGAGTGGGGGATCGATACTCGCCTGGAAGCCCGCGGCGGCATCGCCGGGGTCAAGGCCGAGGTGCATCCGGCGGCGCGCCAGGTGTTCCTCCT GCAACGCAAGAAGAGCAAGGTCGGCGACGGCCTCGGCAAGACCACCGGCTGGATCCATCGCGCCGGCCTGAAGAACAAGCAGGTGCAGATGGTGAATGCC GTGGAGTATCTCGGGATCGACGACGCCGGCCTGCATATCCGCGTTGCCGAGGGCGAGCCGCAGGTGCTGCCGGTGGATACCGTGATCGTCTGCGCCGGCC AGGACCCGCTGCGCGAGTTGCAGGACGGCCTGCTGGCGGCCGGCCAGAGCGTGCACCTGATCGGTGGCGCCGACGTCGCCGCCGAGCTGGATGCCAAGCG CGCCATCAACCAGGGTTCGCGCCTGGCCGCCGAACTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGCCTTTCCGCGATCTGTTGCGTAGCGGAGAAACTGCGTTGAAAACGGCTTTTCTCCAGCTCGCACAGGTTCTGCGTATCGCCCCTGTCCGCCCTCGTC GGCGCGGCGGGGCGCTGCGCACCGGTTCGGTGAACGGTGGCGCTCTGCCACGGTGATCTCCGTCCGCTCAAAACCCGACCGCTTCACAATTTCCCCTACC GCTCGGCGGGCCGTCCGGCATCGCCCGGGTGTCTGCCAACCCAGTCACATTGCCCGCGACATTTTTTCCCCTAGACTTGCCCGAACAACGAGATAGCGCC TGTTTTTCAGGTGACATGCCAGATGGGTACTGCCGGATGCGGGCCGCCTCGCCAGGCGTTCGAGGGTTAGCGATGAGCATGCAGAAAAAGCCACAGATGG CGGAGGCCGTGCTGTTCTTCAACGACAGCGGCGTCTGCAAGGAAATGCTGTATCCCGAATTCGAGGCGCTGCTCGATGGCCTGGTGCGCATGCCGGAATA
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| Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MTAAVPYPHLLAPLDLGFTTLRNRTLMGSMHTGLEEKPQGFERMAAYFAERARGGVGLMVTGGIGPNEEGGVYSGAAKLSTPEEAEKHRIVTQAVHEAGG KICMQILHAGRYAYSPKQVAPSAIQAPINPFKPKELDEEGIEKQIADFVNCASLAQVAGYDGVEIMGSEGYFINQFLVQHTNQRTDRWGGSYENRMRLPV EIVRRVREAVGPNFIIIYRLSMLDLVEGGSSWDEIVLLAKAVEKAGATLINTGIGWHEARIPTIATKVPRAAFTKVTAKLRGEVGIPLITTNRINTPEVA EKVLAEGDADMVSMARPFLADPDFVNKAAAGHAERINTCIGCNQACLDHTFGGKLTSCLVNPRACHETELNYIPTTRPKKIAVVGAGPAGLAAATVAAER GHRVSLFDAAGEIGGQFNVAKRVPGKEEFHETLRYFRNKLESTGVELHLNRRVDVDDLVAGGYDEIVLATGIVPRTPAIPGIEHPKVISYLDAILERKPV GGKVAVIGAGGIGFDVSEFITHAGPSTSLEREAFWKEWGIDTRLEARGGIAGVKAEVHPAARQVFLLQRKKSKVGDGLGKTTGWIHRAGLKNKQVQMVNA VEYLGIDDAGLHIRVAEGEPQVLPVDTVIVCAGQDPLRELQDGLLAAGQSVHLIGGADVAAELDAKRAINQGSRLAAEL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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