Pseudomonas aeruginosa AZPAE14934, NS50_RS05460
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14934 AZPAE14934_contig_3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAACCGGCTGCGATACCACTGGTTGCTGCCCTCCAGGTGCTCGGGCGTCTGGATCAGCGCCGCCATCAGCGCCGCCGCTTTGCTGCTGGACAGCTCGTC CGAACGCTGGGTCGCCTCGGCATGTGCGCGAACCCGCGTCAGTGGCGTCGGCTGCTTCCCTGCCACCGCTTCGAACAGGCTGTCGTAGGCCTTGCCCCAG CGCTCGAAGATCGCGTCGATCAGCGCATCCTTGGTACCGAAGCAGTACTGCACGCCGCCCTTGGTAATGCCCATTTCCTTCGCCACCGCATCGATGGTCA GGCCGGCCGCGCCTTCGCGACCGATCACCGCCTCGGCGGCATCGAGCAACTGGTCACGGTCGATCGTTCGTCGGCGTCCCATGGCTACCTCTTGAGTTTA AATCCATACGTATGTATTTATATTTTCACGCGCCCGCCCGTGGCGCGCAATTCCCGTTATCCACGGCGAGCGATGAACCGTTCGCCACAGAGGTTATCCC
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| DNA Sequence for Gene |
>NS50_RS05460
ATGTTCCGGCAGAACCGCTGGCTGGTCCTGGCCATCGTCTCCAGCGCCCTGTTCCTCATCATCATCGACATGACCGTGCTCTACACGGCCCTGCCGCGCC TGACCCACGACCTCGGCGCGACGGCCGCGGAGAAACTCTGGATCGTCAACGCCTATCCGCTGGTGGTCGCCGGCCTGCTGCCCGGCGCCGGCTTGCTCAG CGACCGCCTTGGCCACAAGCGGCTGTTCCTCGCCGGCCTGCCGCTGTTCGGCCTGGCCTCGCTGTGCGCCGCCTTCGCCCCCAGCGCCGCGGCGCTGATC GCCGCCCGCGCCGGGTTGGCGGTGGGCGCGGCACTGATGATGCCGGCGACCCTGTCGATCGTCCGCCATGTCTTCCAGGACGAACGCGAACGCGCCCTGG CCATCGGCATCTGGGCCTCCGTCGCCTCTGCCGGCGCGGCGCTGGGGCCGGTGGTCGGCGGCGTGCTGCTGGAGTTCTTCTGGTGGGGCTCGGTGTTCCT CATCAACGTCCCGGTGGTGGTCGTCGCTTTGTTGCTGGCGCTGCCGGCCATCCCGGCCTGCGGCGGCCAGTCGCGGCGCCCATGGGACGCCCTCGGCTCG CTGCAGGTGATGTTCGGCCTGGTCGGGGTGGTCTATGCAATCAAGGAACTCAGCGCGCGCGCCCCGGACTTCGGGCTGGCCGTCCTCGCCGCGCTCGGCG GCATGCTCTGCCTGTACCTGTTCGTCCGCCGCCAGCGCCGCGCCCGCGAACCGATGATCGACTTCGCGCTGTTCCGCAACCGGCGCTTCGCCCGCGGCGT CGCGGTGGCCCTGGTGGCGACCATGGCGCTGGTCGGCATGGAACTGGTGTTCAGCCAGCACCTGCAACTGGTGCAGGACCTGACGCCGCTGAAGGCCGGC CTGTTCGTCCTGCCGATCCCGCTGGCCTCGCTGGTGGTCGGGCCGCTGGCCGGCTGGCTGGTGCCGCGCTGGGGCGAGAACCGGGTGATGTGCGCCTCCC TGCTGCTCGGCAGCGCCGGATTGCTCGGCCTGGCCCTGTCCTACCAGGCCGCCACCGGAGCGCAACTGGCCAGCCTGGTGCTGCTCGGCGTCGGCTTCGG CGGCGCGATGACCGCCGCCTCCACCGCGGTGATGCTCAACGTGGACGAACAGAGTTCCGGAATGGCGGCCGCCATCGAGGACGTATCCTACGAACTGGGC GGGGTGATCGGCGTGACCCTGCTCGGCAGCCTGATGAGTTTCGTCTACGGGATGTCGCTGAGGCTGCCCTCGGCCGAGCTGCCGGCGCGGGTCCGCGACA GCCTCGACGACGCCCTGTTGGTCGCCGAGGGCCTGGCGCCGGAGGTCGCGTCGCGGCTCGTCGAGCTTGCCCGGCAGGCTTTCGACCAGGCCTTCGTCGC CGTGCTGCTGGCCGCCGCCGCGCTGCTCTTCCTCAGCGCCATGGCGGTCCTGCGCCAGCCGCGTCCGGCTACAGAGCCAGCGCCACCAGCACCGCACACT CGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTCGACCAGCGCGCCGGCGGTGTCCCCGGTGGTGCCGCCGAGGCGCGCGAGGAAACGGCTGCGCAGCCAGGCGAAGAGCATCAGCGTCACCAGCAACGC CAGCAGGCCGGCCAGGCCGAACGCCAGGGCCAGGCCGAAACTCACCCCCAGCACCCACGGCAGGCTGCGCGCCGGCAGGTGCTCGGCGATGGCCTGGCCG AGGCCGCCGGGGCGCGCGTAGGGCGTGGTCAGGAACAGCAGCGGCAGGCTGCTGCGCGCCAGCCACGGAGCCAGCGGCAACAACCCGGCCTCGCCCTGGC CGAGCAGCGCCGCCAGGGCGGAGAACTTCAACAACAGGACCAGTACCAGGACCACCACCGCCACCGGGCCGCTGCGCGGGTCCTTCATGATCGCCAGGGT CCGCTCGCGGTCGCCCAGCCCGCCGACCCAGGCGTCCGCCATGTCGGCCAGGCCGTCCAGGTGCAGCGCGCCGCTCAGCGCCACCCACAGGCTCAGCAGC
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| Amino Acid Sequence |
>MFS transporter
MFRQNRWLVLAIVSSALFLIIIDMTVLYTALPRLTHDLGATAAEKLWIVNAYPLVVAGLLPGAGLLSDRLGHKRLFLAGLPLFGLASLCAAFAPSAAALI AARAGLAVGAALMMPATLSIVRHVFQDERERALAIGIWASVASAGAALGPVVGGVLLEFFWWGSVFLINVPVVVVALLLALPAIPACGGQSRRPWDALGS LQVMFGLVGVVYAIKELSARAPDFGLAVLAALGGMLCLYLFVRRQRRAREPMIDFALFRNRRFARGVAVALVATMALVGMELVFSQHLQLVQDLTPLKAG LFVLPIPLASLVVGPLAGWLVPRWGENRVMCASLLLGSAGLLGLALSYQAATGAQLASLVLLGVGFGGAMTAASTAVMLNVDEQSSGMAAAIEDVSYELG GVIGVTLLGSLMSFVYGMSLRLPSAELPARVRDSLDDALLVAEGLAPEVASRLVELARQAFDQAFVAVLLAAAALLFLSAMAVLRQPRPATEPAPPAPHT R
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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