Pseudomonas aeruginosa AZPAE14934, NS50_RS19820
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14934 AZPAE14934_contig_17, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGCAGCTTTACGTTAACGTAAAGGTAAACAAGCAGGTGCCAGCGTATGTCCATCACCTACACCATCTCCGATCTCGCCCGCGAACTGGACATCACCAC CCGCGCCATCCGCTTCTACGAGGAGCAAGGCCTGCTCTCCCCCGAGCGACGCGGCCAGGAACGCATCTATTCGCCGCGCGACAAGGTCAGCCTGAAGCTG ATCCTGCGCGGCAAGCGCATCGGTTTTTCCCTCGCCGAATGCCGCGAACTGATCGAGCTCTACGACCCGGACCCGAGCAGCGGCAACCAGAAGCAGTTGA ACACCATGCTGGAGAAGATCGCCGAGCGCCGCGCCCAGCTGGAACAACAGTTGCTGGACATCGAACAGATGCAGCTGGAACTGGATACTGCCGAGGAGCG CTGTCGAGCGGCGCTTATCAAAAGCTATAACAAACAGACAGTTGAAACATAAACCTCATTCAAAGCTTTAAACCGGACAAGCACAATTACAGGTGAAAGC
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| DNA Sequence for Gene |
>NS50_RS19820
ATGACCTATCCCAGCCTCAACTTCGCCCTCGGCGAAACCATCGACATGCTCCGCGACCAGGTGCGTGGCTTCGTCGCCGCCGAACTGCAGCCGCGCGCCG CGCAGATCGACCAGGACAACCAGTTCCCCATGGACATGTGGCGCAAGTTCGGCGAGATGGGCCTGCTCGGCATCACCGTCGACGAGGAGTACGGCGGTTC GGCGCTGGGCTACCTGGCCCACGCCGTGGTCATGGAAGAGATCAGCCGGGCCTCGGCCTCGGTGGCGCTCTCCTATGGCGCGCATTCCAACCTCTGCGTC AACCAGATCAAGCGCAACGGCAACGCCGAACAGAAGGCCCGCTACCTGCCGGCCCTGGTATCCGGCGAACACATCGGTGCGCTGGCGATGAGCGAACCCA ACGCCGGCTCCGACGTGGTCTCGATGAAGCTGCGCGCGGACCGGGTCGGCGACCGCTTCGTTCTCAACGGCAGCAAGATGTGGATCACCAACGGTCCCGA TGCCCATACCTATGTGATCTACGCCAAGACCGACGCGGACAAGGGCGCGCACGGGATCACCGCGTTCATCGTCGAGCGCGACTGGAAAGGCTTCAGTCGC GGGCCGAAGCTGGACAAGCTGGGCATGCGCGGCTCGAACACCTGCGAACTGATCTTCCAGGACGTCGAGGTACCCGAGGAGAACGTCCTCGGCGCGGTCA ACGGCGGGGTCAAGGTACTGATGAGCGGCCTCGACTACGAGCGCGTGGTGCTTTCCGGCGGCCCGGTGGGAATCATGCAGGCGTGCATGGACGTGGTGGT GCCGTACATCCATGACCGCCGCCAGTTCGGCCAGAGCATCGGCGAATTCCAGCTGGTCCAGGGCAAGGTGGCCGACATGTACACCGCCCTCAACGCCAGC CGCGCCTACCTGTACGCCGTGGCCGCCGCCTGCGACCGCGGCGAGACGACCCGCAAGGACGCCGCCGGGGTGATCCTCTACAGCGCCGAGCGCGCCACCC AGATGGCCCTGGACGCGATCCAGATCCTCGGCGGCAACGGCTACATCAACGAGTTTCCCACCGGCCGCCTGTTGCGCGACGCCAAGCTCTACGAGATCGG CGCCGGCACCAGCGAGATCCGCCGCATGCTGATCGGCCGCGAGCTGTTCAACGAAACCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCCTCGCTCTTCCCGGCCCTTTGCCGCCAGGGAGAGGGCATTCCATTGCATCGACAGGCGCATCGCCAGGTCGGGAGCGGACGCCAACCGCTTCCGCCC ACCTCGACACGGAGCCACCGCCATGGCCATCCTGCACACCCAGATCAATCCACGCTCCGCCGAGTTCGCGGCCAACGCCGCGACCATGCTGGAACAGGTC AACGCCCTGCGCACCCTCCTCGGCCGCATCCACGAAGGCGGCGGTAGCGCCGCCCAGGCCCGGCACAGCGCGCGCGGCAAGCTGCTGGTGCGCGAACGCA TCAACCGCCTGCTCGACCCCGGCTCGCCGTTCCTCGAGCTTTCCGCCCTCGCCGCCCACGAAGTCTACGGCGAAGAGGTCGCCGCCGCCGGCATCGTCGC CGGGATCGGCCGGGTCGAAGGGGTGGAATGCATGATCGTCGGCAACGATGCCACGGTGAAGGGCGGCACCTACTATCCGCTGACCGTGAAGAAGCACCTG
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| Amino Acid Sequence |
>isovaleryl-CoA dehydrogenase
MTYPSLNFALGETIDMLRDQVRGFVAAELQPRAAQIDQDNQFPMDMWRKFGEMGLLGITVDEEYGGSALGYLAHAVVMEEISRASASVALSYGAHSNLCV NQIKRNGNAEQKARYLPALVSGEHIGALAMSEPNAGSDVVSMKLRADRVGDRFVLNGSKMWITNGPDAHTYVIYAKTDADKGAHGITAFIVERDWKGFSR GPKLDKLGMRGSNTCELIFQDVEVPEENVLGAVNGGVKVLMSGLDYERVVLSGGPVGIMQACMDVVVPYIHDRRQFGQSIGEFQLVQGKVADMYTALNAS RAYLYAVAAACDRGETTRKDAAGVILYSAERATQMALDAIQILGGNGYINEFPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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