Pseudomonas aeruginosa AZPAE14934, NS50_RS18785 (fecE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14934 AZPAE14934_contig_15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACACCCTGCGCCTCCAGCTCCGCACGGTATGGCGCGGCGCTGTCGGCGCCGGTGGCGGAGGCGACCAGCAGGTCCGGATCCTGGGCGATCACCGCTTCGA TGTCGAAGCGCAGGTTGCGGTAGAGCACCTCGACGCCACGTTGGTCGGCGACCTTCGCCCATTGCGAGAAGAAGCCCTTGGCGTCGGTCAGGCGACTTGG CGTGGTGGCGGCGCTGGCCACCAGCGGTGCGTCCATCGCCAGCAGGATGCCGGTGACGCTCGGGGTGGTGGAGACGATCCGCGCCGGCTTCGGCTCCCCG GCCGCGGCGAGGGTGGCGAACAGGCTCAGGGCGAGGGCGAGTAACGGCAGGGCGGAGCGGCGGCGGGTCGGCATGAAGGCTGTTTTCGCTGTAGGGGAAG CCGGGCGGACGGATTCATATGATAATGCTTCTCATGCAGTCTATTCCATAATGTAGAATCGATTCCACATATTCGAGCCATTCTTATCCAGGAACCTCCC
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| DNA Sequence for Gene |
>NS50_RS18785
|fecE
ATGACCCATCGCCTGCACGCGGACGCCGTGACCTTGCGCCGCGACGCGCGAACCGTTTCGCGGAATCTCTCGCTGGCCATCCCCGAGGGTTCGTTCAGTG TGATCGTCGGGCCCAACGCCTGCGGCAAGTCGACCCTGCTGGCGGCATTGTCGCGCCTGTTGGCGCCGGCCGAGGGCCGGGTGGTGCTGGACGGCAGGGA TATCCACAGCCTGCCGGGACGGGAAGTGGCGCGGCGTCTCGGCCTGCTGCCGCAGAGCGCGCTGGCGCCGGATGGCATCACGGTGGCCGAGCTGGTGGCG CGCGGGCGCTATCCGCACCAGTCGTTCCTGCGCCAGTGGTCGCCGGCGGATGAGCGCGCGGTAGCGGCGGCGTTACGCGCCACGCGGGTCGACGGCCTGG CCGAGCGACCGCTCGATGCGCTCTCCGGCGGCCAGCGGCAACGCGTGTGGGTCGCCATGGTGCTGGCGCAGGAAACCCCGTTGCTGCTGCTCGACGAGCC AACCACCTACCTGGATATCGTCCACCAGATCGAATTGCTCGAACTGCTCGCCGAGCTGAATCGCCAGGGGCGCACCATCGTCGCCGTGCTGCACGACCTC AACCAGGCCTGCCGCTATGCCTCGCACCTGATCGCCATGCGTGACGGCGCGATCCTCGCCGAGGGCGCGCCGGCGCATATCTTCACCGAGCGTCTGGTGG AGGAGGTGTTCGGCTTGCGCTCGTTGATCATCGCCGACCCGGTCAGCGGCACGCCGCTGCTGGTGCCGCGCGGGATCGCCGCCGACGCGCGGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTGGCTCAGCGCGGCGGCGGCCGCATGCCGGGGTGGAGTACCAGGCCACCGGTGGACTGGTTGACCTGCAGCGCCTCGTGGAACAGCGCGTCGCGGTCT TCCGCCGACTGCAACTGGCCGAGATCGGTCACCGTGGTCATGGCGCAGACGATCTCCTGCTGGGCGTCGAACACCGGCGCCGCCTGGCCGGTGACATTCG ACAGCAGGTGGCTGGTCAGTTCGGCCCAGCAGCGCTCACGCACCTCGTCGAGCAGCGCGCGGCTCGGCGGGCTGCCGCGGAAGTGCGCCGGTTGCTGCTT GCGCGCGGCGTCGACCACGGCCTTCGGCAGGAAGGCCTGGAACACCAGGCCGCAAGCGGTATTGTCGATGGGCAGGATATCGCCCAGGGCCAGCGGGTTG ATCGAGAAATAGGCGCTGCGGTACCAGCGCACCAGGGTCGGGCCGCGCTCGGTCCAGATCGCCACCCCGCCGCTGGCGGCATGCCGTTGGGCCAGGGCCT
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| Amino Acid Sequence |
>ABC transporter
MTHRLHADAVTLRRDARTVSRNLSLAIPEGSFSVIVGPNACGKSTLLAALSRLLAPAEGRVVLDGRDIHSLPGREVARRLGLLPQSALAPDGITVAELVA RGRYPHQSFLRQWSPADERAVAAALRATRVDGLAERPLDALSGGQRQRVWVAMVLAQETPLLLLDEPTTYLDIVHQIELLELLAELNRQGRTIVAVLHDL NQACRYASHLIAMRDGAILAEGAPAHIFTERLVEEVFGLRSLIIADPVSGTPLLVPRGIAADARG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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