Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2076

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CATGCGATTGATGATCGCCTCGGCATGCGGCAGGCGGAAAATGCGCGGTTTGGGGTTGCCCGGCTGTGGACGTGGCGTCACAGTACCGATCTCGACGAAG CCGAAGCCCAGCTGCGCAAAGCCATCAATGGCTGCACCGTTTTTGTCCAGACCTGCTGCCAGCCCCACAGGGTTGGGAAATTCCAGCCCCATCACACTGA CCGGCAACTTCGCCGGGGACTTGCTCAGCAGGCCATTAAGGCCCAGCCGCCCGCCTGCACCGATCAGGTCCAGCGACAGGTCATGAGAGGTTTCCGGAGA AAGTTTGAACAGTAACTGGCGGGCCAGGTTATACATGGCGGGATGGGCTCGTGAGCAGCTGAATTCAGGGTGGCGATTATAGACGCGTGCAGGCCTGTCA GGCGAGGCGCGAGACAAACTTGTTGCTCACTCTTCCCCGGCGATGGCATATGCCTTGCTTGAAACCGCTATCGGCACTCACTCCAACGGCGGAGCGGTGC
DNA Sequence for Gene
>PSPPH_2076
ATGGACAACGGCGTCGCTTCGACACTTGCATTGCAATGGGTCGGACGACGCCTTTTTTCTGGACGGACCTTTGATGAAGCACGCGCGATGAACGAACGAA CCGGTAATGCGCTGGACTGGGTGGCCGGTAGTGACGCCCCGGAAATGAACAGCCTGGACGTGGGCTTCATGGCATTGACCGACTGCGCCCCGCTGGTGGT TGCGGCCACTCAAGGTTTCGCCCAGCCATACGGCCTGAGCCTGAACCTCGAGCGTCAGACCTCCTGGGCCGGGCTGCGCGACAGACTGGTCAGCGGGCAG TTGCAGGCGGCACACAGCCTGTATGGTCTGATCTATGCGGTGGAACTGGGCATCAGCGGTGGTCCGGCGACCGACATGGCCATCCTCATGGGACTCAACC AGAACGGCCAGTGCATCAACCTGTCCCGCGAGTTGCAGCAGGCGGGCGTGATCACTCCTGAAGCACTGGACAAACGCGCGCACCAAAGCGGATCAAGGCT GACCTTCGCGCAGACCTTCCCCACCGGCAACCACGCCATGTGGCTCTACTACTGGCTGGCCAGCCAAGGCATCCATCCGCTCGATGATGTGACCAGTGTC GTGGTGCCACCCACGCAAATGGCGCAACACCTGCAGGCTGGGCGCATCGACGGTTTCTGCGTCGGCGAAACCTGGGGCGCCAGCGCCGTTCAGCAGCAAC TGGGCTTCACCATGGCGACCAGCCAGTCGATCTGGCCGGACCACCCGGGCAAGGTGCTGGGCTGTACCCGTGAGTTCGTCGAGCAGAACCCCAACACCGC CAGAGCGCTGATCATGTCCGTACTGGAAGCGAGCCGCTTCATCGAGGAAAGCGACCATAATCGGCGCAGCACCGCACAACTGCTCAGCGGTGCGGATTAT CTGGATACCTCGCCGGACTGCATCGAGCCGCGCCTGCTTGGCCACTACAGCGACGGCCTCGGCAATCACTGGCAGGATCCGCATGCAGTCAGTTTCCATG ATCAGGGGCAGGTCAATTATCCGTGGCTGTCCGACGGCATGTGGTTCATGACTCAGTTCCGGCGCTGGGGCCTGTTGCGTGAAGACCCGGATTACCTGGC TGTCGCCAGCCGTGTCCAGCAACTGGACCTGTATCGCCAGGCAGCTGATGCGCTGGGCATCGACGCACCCACTGCAACCCTGCGCAGCAGTCAGTTGATC GATGGCAAGGTCTGGGACGGCAGCGACCCCGCAGGCTACGCGCGTAGCTTCAAGCTCCACTCGCTGGCCGCCAACGCGCCCGCTGTGGCCAGTCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGAGAACGTGACCATGCTGCGTATCCTGCTTATCAATGACACGGCCAGAAAAGTCGGTCGCCTCAAATCGGCATTGATAGAGGCCGGTTTTGAAGTAAT CGACGAATCCGGACTGATCATCGACTTGCCCGCCCGCGTTGAAGCGGTGCGCCCGGACGTCATCCTGATCGACACCGAATCGCCAGGACGCGACGTAATG GAGCAAGTGGTGCTGGTCAGCCGTGACCAGCCGCGGCCCATCGTGATGTTCACCGACGAGCACGATCCGGGCGTGATGCGCCAGGCAATCAAGTCCGGGC TCAGTGCGTATATCGTCGAGGGTATCCAGGCCCAACGGCTGCAACCGATTCTGGACGTGGCGATGGCCCGTTTCGAGAGCGATCAGGCGCTGCGTGCGCA ACTGCATGCCCGCGATCAGCAACTGGCCGAACGCAAGCGCATCGAGCTGGCCAAGGAGCTGCTGATGAAAATGAAGGATTGCAACGAGGAAGACGCGTAC
Amino Acid Sequence
>nitrate transporter component
MDNGVASTLALQWVGRRLFSGRTFDEARAMNERTGNALDWVAGSDAPEMNSLDVGFMALTDCAPLVVAATQGFAQPYGLSLNLERQTSWAGLRDRLVSGQ LQAAHSLYGLIYAVELGISGGPATDMAILMGLNQNGQCINLSRELQQAGVITPEALDKRAHQSGSRLTFAQTFPTGNHAMWLYYWLASQGIHPLDDVTSV VVPPTQMAQHLQAGRIDGFCVGETWGASAVQQQLGFTMATSQSIWPDHPGKVLGCTREFVEQNPNTARALIMSVLEASRFIEESDHNRRSTAQLLSGADY LDTSPDCIEPRLLGHYSDGLGNHWQDPHAVSFHDQGQVNYPWLSDGMWFMTQFRRWGLLREDPDYLAVASRVQQLDLYRQAADALGIDAPTATLRSSQLI DGKVWDGSDPAGYARSFKLHSLAANAPAVASR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site