Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1927
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AAACACCGAAACACATGCTGCGCCTCAACACCAGCTACAACCTGCCGGGCGCATGGAACCGCCTGACCCTGGGCACCGGCGTGTCGGCAGATTCGGGCTA TGAAGTGCCGTCCAACAAACAGCTGGGCGTTTCTGGCAAGGCCATCTGGGATGCGCGAGCCTCTTGGAAACTGGACGAGAACTGGAAGGTGTCGCTCAAC GCCGAAAACCTTTTCGACCGCAAGTATTACAGCACCTCGATCGCCACCGACCGCTCCAACGTCTACGGCGAACCGCGCAGCTATGTCCTGACCTTGCGGG GGGATTTCTGATCTGAGTCCAGGCTTTTGATTCTGGCCGAAGGCCGTGGGAGCGAGCCGGGCGACGCTTCATTTGTTCGCGAAGAAGTCAGTATGTTCTC CGAAAATGCATTGTCTGAACGACCGTCTTCGCGAACAAGTTCGCTCCCACAGGGATTTGCATTTATCCTGCACCCTCGATTTCAATGAGCCATCCTTCCC
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| DNA Sequence for Gene |
>PSPPH_1927
ATGCCAACACCCTTCAGCCGTCTGCGCACAGGCCGCGTGAAAACGCTTGGCTTGCGTCTGGGCGGGCTGGTGCTGGCATTGGCTTTTCAGGGCGAGGCAC TGGCTGAAGAGTTCGACTTCGATATCCCCGCACAACCCTTGAACAGCGCCCTTAAAGAGCTGGGTCGCCAGGGCGACCTGCAAATTCTTTACAACCCCGA TGATGTGAACGGCAAGTTCAGCGGCCCGGTGCACGGCAGGTTGACGCCTGAACAGGCGGTCGCGGATCTGCTGAAACAGGCTGGTGTAACGCACAACCTC GAGGCCGATACGCTGACCCTCGGCAGCGCGGCGTCCGCGCACCCCATGAACCTCGGGCCGGTGGCGATCAAGGGCGACCCGTTCGGTATCACCACCGAGG GCAGCGGCTCGTATGCGACGACCGGCGTGAGCATCAACAAGACGTCACAATCGCTGCGCGAAACCCCGCAATCGGTCACGGTCATGACCCGTCAGTTGAT GAACGACAAAAACCTCAACGGCCTCGACGAGGTGATGGCGCAGACGCCTGGCATCACCTTTTCGCAACGCAACTTTGGCTCTCATGTGTTCAGCTCGCGG GGCTTCGCGCTGGAAGACGAGAGCTACACCATCGATGGCGTTGCCGGTCAGGGTTACAGCGTGACCGGCTGGATGACCCCGGACACGGAGATCTACGACC GCGTCGAAGTGCTGCGCGGTGCTGCCGGACTGTTGATCGGCGCGGGCAACCCCGGTGGCGCGGTCAATCTGGTGCGCAAGCGGCCGACCGCCTTACCGCA GTTCTCGATCACCACCCGCGCCGGCAGTTGGGACCAGTACCGGGTCGATCTGGATGGCAGCAGCAAGCTCAACGATTCGGGCAGCGTGCGCGGGCGTTTT GTCACGTCTTACGAAGACCGTGGATACTTCATCGACGGCCTGAAAAAGACTGCGCCGCTGTTGTACGGCATTCTGGAAACCGACCTGAGCGAAGACACCA CACTCACGCTGGGCCTGCGCCATCAAAGCGCGGATACCCACGGCTATTCGATTTTCGGCCTGCCCCGCTACAGCAACGGCAAGGCCATTGATCTGCCGCG CTCCACCTCCTTGGCCCAGGACTGGAACCGTCATCAGACCCGCACCGACGAAGTGTTCAGCGAACTGGAAACCCGCTTTGACGAAAACTGGAGCGGCACA TTGTCTGCCACTCACTCCGATGGGGCTTTCGATCAGAAAGTCGCCTACGCAAAAGGCGCCATAGACCCTGCGACCCAGAGCGGTTCACGACTGGTCAGAA CCCTGTTTCGCTCGGACACGCTGCAAAGCGACGGTTTCGACAGCCATCTGGACGGTCGTTTCGACGCCTTTGGCCTGACCCACCAGTTGACCATCGGCGG CAACTGGTCTGAGCAAAAACGTGATTCGCGCTATGCCACCGTCAACAGCAATCGGCCGCTGGACATCTTCAATCCCGATCACGACGCGATTGCTGAACCT GCGCGTCCGGCCTGGCGCAGCACCGACTACAGCGACAAGCGTTATGGCGTTTACAGCAACCTGCGCCTGAGCCTGACCGAGTCGTTGAGCCTGGTCATGG GCGGCCGGGTCAGCTGGTATGACTATCAGAGCCAGTCCGCAGGCGTGACTACTCGCGCTCAAGAGGAAAACCAGGTCACGCCGTTCGTTGGCGTGATCTA CGATCTGAACCGAGACTGGTCGTGGTACGCCAGCCACACCGATATCTTCCTGCCGCAAAGCGGTTATAGAACGGCATCCGGCGCATTTCTTGACCCGGCC ATCGGTGCCAGCCATGAAACCGGCATCAAGGGCGAGTTGTTCGACAAGCGCCTGAACGTGTCTTTCGCGCTGTTCTATGTGAAACAGAAAGACGTGGCGG TCGAGGACGATGCCAATGCGGGCCAGTGCCTGAGCAACGACGCTTACGGCACCTGCTATGTGAATGGCGACATCCGGCGCAGCAAGGGTATCGACATGGA GATCAGCGGTGAACCGTTACCGGGATTGCAGACCCTGGCCGGTTACACCTTCAACCTCACGCGCGGCAGCGACGGGAAATCGATTTCAGCAGAAACACCC CGGCACATGCTGCGCTTGTCCAGCAGCTACAACCTGCCCGGCACCTGGCGTCGACTGACCGTCGGCGGCGGTGTGTCGGCGCAAAGCGGCTACTCGGAGC ACGAGTCGACCCAGCCCATAGACAACCCTGGCCGCGCCACCTGGGACGCACGCGCCTCATGGAAGATCGACGAACACTGGTCGGTGGCCCTCAACGGCAA CAACCTGCTGGATCGCAAATACTACAAGGCAACCGGCGACATCGACCGCGGCAACTACTACGGCGACCCGCGCAACTACGTCCTGACGTTGCGCGGCGAT TTTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAGCCCGCGCTCGCGCCTTACAATCAAGACCGGACGCAGAGCGTCCAGAACTGCATGCGACGCAGAGCGCCGCACGATAGTCGCCGGACCAGACACCTAT CGTTCCGCACGCTCAGCGTGGGAATGCCGTTCGTGACGCTCTGCGTCACACAAGCCGCTCGGCAAGCCCGTGCAGAAACACTTCCGCGAGCACCACGTTG TCATGCCGCTGATCAACCGTTGTCGAGCTGCGCAGCCCGTTCACCGAGCACTGTTCAAGCAGCACCGCTTCAGCCCGGGCAATCTGCCCTGGCGCACGGC TCTGCCCGGCCCACCAGCAATCGGCCTGTACGTTAAGCGTTTTCAGGGTAAATGCCTGGCTCAGTTGTGCGTTGGCTTCCAGTAGTTTGTAACCGGTTTC GATCTCGTCCTGAACGGCGATGTCCTGGAATATGCTGCGCAGGTTGTCGGCGTTCATGCCGGCCTCCAGCGCGACATGGTCGACCACCCAGTCAATCACC
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| Amino Acid Sequence |
>Ton-B dependent siderophore receptor
MPTPFSRLRTGRVKTLGLRLGGLVLALAFQGEALAEEFDFDIPAQPLNSALKELGRQGDLQILYNPDDVNGKFSGPVHGRLTPEQAVADLLKQAGVTHNL EADTLTLGSAASAHPMNLGPVAIKGDPFGITTEGSGSYATTGVSINKTSQSLRETPQSVTVMTRQLMNDKNLNGLDEVMAQTPGITFSQRNFGSHVFSSR GFALEDESYTIDGVAGQGYSVTGWMTPDTEIYDRVEVLRGAAGLLIGAGNPGGAVNLVRKRPTALPQFSITTRAGSWDQYRVDLDGSSKLNDSGSVRGRF VTSYEDRGYFIDGLKKTAPLLYGILETDLSEDTTLTLGLRHQSADTHGYSIFGLPRYSNGKAIDLPRSTSLAQDWNRHQTRTDEVFSELETRFDENWSGT LSATHSDGAFDQKVAYAKGAIDPATQSGSRLVRTLFRSDTLQSDGFDSHLDGRFDAFGLTHQLTIGGNWSEQKRDSRYATVNSNRPLDIFNPDHDAIAEP ARPAWRSTDYSDKRYGVYSNLRLSLTESLSLVMGGRVSWYDYQSQSAGVTTRAQEENQVTPFVGVIYDLNRDWSWYASHTDIFLPQSGYRTASGAFLDPA IGASHETGIKGELFDKRLNVSFALFYVKQKDVAVEDDANAGQCLSNDAYGTCYVNGDIRRSKGIDMEISGEPLPGLQTLAGYTFNLTRGSDGKSISAETP RHMLRLSSSYNLPGTWRRLTVGGGVSAQSGYSEHESTQPIDNPGRATWDARASWKIDEHWSVALNGNNLLDRKYYKATGDIDRGNYYGDPRNYVLTLRGD F
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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