Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1704
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGGGCCAGCGTTTTCTGGAGGTGTGGTCGGGCCTGCCCGTGCTGTATCTGTTGATCATTCTCGCCAGCTTCGTGCAACCCAACTTCTGGTGGCTGCTG GGCATCATGCTGCTGTTCTCCTGGATGAACCTGGTGGACGTGGTGCGTGCCGAGTTCCTGCGTGGCCGGAATCTGGAATATGTAAGAGCCGCGCGAGCGC TGGGCATGGAGAACGGCGCGATCATGTTCCGCCATATCCTGCCCAACGCCATGGTCTCGACCATGACCTTCATGCCGTTCATCCTCACCGGGGCCATCGG CACCTTGACTGCACTGGACTTCCTGGGCTTCGGCCTGCCCGCCGGATCACCTTCGCTGGGCGAACTGGTGGCGCAGGGCAAATCCAACCTGCAGGCACCC TGGCTGGGCATCAGCGCGTTCGCTGTGCTGGCCATTATGCTGAGCCTGCTGGTGTTCATCGGCGAATCTGCCCGCGATGCTTTCGACCCAAGGAAATAAG
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| DNA Sequence for Gene |
>PSPPH_1704
ATGAGCAATGACAATCTGATCGAAATCCGCGATCTGGCGGTCGAGTTCGTGACGGGCGACTCACGGCAACGGGTGGTCGAGAACATCAGTTTTGACATCC GTCGGGGTGAAACCCTCGCACTGGTCGGCGAAAGCGGCTCGGGCAAATCGGTTACAGCGCATTCGATCCTGCGCCTGCTGCCCTACCCCATTGCCAGTCA TCCGAGCGGCACTATCCGCTACGGCGGTGAAGACCTGCTGAAAGTGGAAGAGAAAAAGCTGCGCTCGATCCGTGGCAACCGTATCGCCATGATCTTCCAG GAACCGATGACTTCGCTGAACCCACTGCACTCGGTCGAAAAACAAATCAACGAGGTACTGGGCCTGCACAAGGGCCTGACCGGCAAGGATGCCACCAAAC GCACGCTGGAGCTTCTTGAGCTGGTCGGCATACCTGAGCCACACAAACAGCTCAAAGCCTTGCCACACGAGCTGTCAGGCGGCCAACGCCAGCGTGTAAT GATAGCGATGGCACTGGCCAACGAGCCGGAGCTGCTGATTGCCGACGAACCGACCACTGCACTGGACGTCACGGTACAGCTGAAAATTCTTGAGTTGCTC AAGCAACTGCAGGCTCGTCTGGGCATGGCATTGCTGCTTATCAGCCACGATTTGAACGTGGTAAGGCAAATAGCCAACCGAGTATGTGTCATGCAGCGCG GTTGCATCGTCGAACAGGCATCGTGCGAAGAATTGTTCCGTTCGCCGCAACACCCTTACACCAAAGTGTTGCTCAGCGCAGAGCCCAGCGGCGGTCCTTC GACCAACCCGGCCGGCGCCCCGCTGCTTGAAGTCGAGGACCTGAAAGTCTGGTTCCCGATCAAAAAGGGCCTGCTCAAGCGCACGGTCGACCACGTCAAG GCGGTGGACGGCATACGCTTCAGCCTGCCGCGAGGGCAAACACTGGGCATCGTGGGTGAAAGCGGGTCGGGCAAATCGACGCTGGGGCTGGCGATTCTTC GGCTGATCGGCAGCCAGGGCACCATACGTTTCAAGGGCAACGCGCTAGAATCTCTGTCGCAACAGCAGATCCGTCCGCTGCGCAGGCAGATGCAGGTGGT GTTCCAGGACCCGTTTGGTAGTTTGAGCCCGCGTATGTCAGTGGGTGAAATCGTTGGCGAAGGCTTGCGAATCCATGGCATGGGCACGGCCGCCGAGCAA CAGACGGCGATCATCGAAGCACTCAGGGAGGTTGGCCTGGATCCGGATACCCGGCACCGCTACCCTCACGAGTTCTCCGGTGGCCAACGGCAGAGGATCG CCATTGCACGTGCGCTGGTATTGAAACCGGCGCTTATCTTGCTGGACGAGCCGACGTCAGCCCTCGACCGGACCGTACAGCGTCAGGTCGTCGAGCTGCT TCGCTCGCTGCAAGCCAAGTACAATCTGACGTATTTGTTCATCAGCCATGACCTGGCTGTCGTCAAAGCGCTAAGCCACCAGCTGATGGTGGTCAAGCAA GGCCAAGTGGTCGAACAGGGTGCAGCGCAGGACATCTTCGCCGCACCGCAACATCCTTATACACAGCAGCTGCTGGAAGCCGCCTTTTTGGCGCCGGTAG CTGTCGATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGAAGAGGAACAACACATGGGTTTTCTCGCCGGTAAGCGCGTCCTGATCGTCGGTGTCGCCAGTAAACTGTCCATCGCATCCGGCATTGCTGCCACCA TGCATCGTGAAGGTGCAGAACTTGCTTTCACCTACCAGAACGACAAGCTCAAGGGCCGTGTCGAAGAGTTCGCCGCAGGCTGGGGCTCAGGTCCTGAGCT GTGCTTCCCTTGCGATGTGGCCAGCGACGAAGAGATCACCAAGGTCTTTGAAGAGCTGAGCAAGAAGTGGGACGGCCTGGACGTGATCGTTCACTCGGTC GGCTTTGCTCCGGGTGACCAGCTCGACGGCGACTTCACCGACGCCACCACTCGCGAAGGTTTCCGCATCGCTCACGACATCAGCGCCTACAGCTTCGTGG CCCTGGCCAAGGCTGGTCGCGAAATGATGAAAGGCCGCAATGGCAGCCTGCTGACCCTATCGTACCTGGGCGCAGAGCGCACCATGCCCAACTACAACGT
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| Amino Acid Sequence |
>ABC transporter ATP-binding protein
MSNDNLIEIRDLAVEFVTGDSRQRVVENISFDIRRGETLALVGESGSGKSVTAHSILRLLPYPIASHPSGTIRYGGEDLLKVEEKKLRSIRGNRIAMIFQ EPMTSLNPLHSVEKQINEVLGLHKGLTGKDATKRTLELLELVGIPEPHKQLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELL KQLQARLGMALLLISHDLNVVRQIANRVCVMQRGCIVEQASCEELFRSPQHPYTKVLLSAEPSGGPSTNPAGAPLLEVEDLKVWFPIKKGLLKRTVDHVK AVDGIRFSLPRGQTLGIVGESGSGKSTLGLAILRLIGSQGTIRFKGNALESLSQQQIRPLRRQMQVVFQDPFGSLSPRMSVGEIVGEGLRIHGMGTAAEQ QTAIIEALREVGLDPDTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVKALSHQLMVVKQ GQVVEQGAAQDIFAAPQHPYTQQLLEAAFLAPVAVD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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