Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1672 (fadH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCTCGGGGAGTACTACCACCGTTCTGTGGTTGATCAGCCCGTAATCGCGGGCCTGTTGCAGATAGGCGGCCAGCTTGCGGTGCAGTCGGTCAGTGTTC TGATAGTCCGTTGGGAACAGCTCCGGCTCGATGCCCAGCAGGTTTCCGCGTTCACTGGGCTCGCCTTCATTGATTGCCAGGCGAATGCGCAGATCGGACA GGTAGTGGCCCGCCGGACGTTGTCCGGTCCAGACTGCGTAGCTGACAAGGCTGGCTATGCTCAGCAGGATCAGACAGATGGCGAAGAGTTTGCGCATAAA AAGGCCGGCTGGCTGCCATCAGGGAATTGTCGACTAGGGTAGGACGACGTCAGGCGCTTGCCAAGTGCCGCTGCGCGTTTGGATCAATAACTTGTCACTT TCGGTCATTGAGTGTGGGGCTGGATGCGTCTTTACTGTTGCCCATGAGAGGACCCGCAGAGGTCCTTGTTTTCCCGTGATTGACTCGATGGAGCTTCGCC
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| DNA Sequence for Gene |
>PSPPH_1672
|fadH
ATGACTGCTGCTCATTACCCGCACCTGCTGGCCCCGCTGGACCTGGGCTTCACAACCTTGCGCAACCGGACCTTGATGGGCTCGATGCACACTGGTCTTG AAGAGCGGCCGGGTGGTTTCGAGCGCATGGCGGCTTATTTTGCCGAGCGGGCACGCGGCGGGGTCGGGTTGATGGTGACCGGCGGGATCGCGCCCAACGA AGAGGGTGGTGTCTACGACGGTGCGGCAAAACTCACCAATGCCGAAGAGGCGGAGCAGCATCGCATCGTTACCCGTGCGGTCCACGAGGCTGGCGGCAAG ATCTGCCTGCAGATCCTGCATGCCGGTCGCTACGCCTATAGCCGCAAGCAGGTTGCGCCGAGTGCTATCCAGGCACCGATCAACCCGTTCACGCCGCGTG AGCTGGACGAAGAGGGCATCGAAAAGCAGATCGCTGATTTCGTGACCTGTTCCACGCTGGCCCGCAGTGCCGGGTATGACGGTGTCGAAATCATGGGTTC GGAAGGCTATTTCATCAATCAATTCCTCGCCGCACATACCAACCACCGCACCGATCGCTGGGGCGGCAGCTATGAAAACCGCATGCGCCTGGCGGTCGAG ATCGTTACGCGGGTGCGTGAGGCGGTCGGTGCGGATTTCATCATTATCTTTCGACTGTCGATGCTGGATCTTGTGGAGGGTGGTAGCACCTGGGAAGAGA TCGTCCAGCTGGCCAAGGCGGTCGAGCAGGCGGGTGCGACGCTGATCAACACCGGGATCGGTTGGCACGAGGCACGTATTCCGACCATCGCCACCAAGGT GCCGCGTGCAGCGTTCAGCAAGGTCACTGCCAAACTGCGTGGTTCGGTGAAGGTGCCGCTGATCACTACCAACCGCATCAATACCCCGGAAGTTGCCGAG CGCATCCTCAGCGAAGGCGACGCCGACATGGTCTCGATGGCTCGTCCTTTTCTGGCCGACCCGGACTTCGTCAACAAGGCTGCGGCGGGGCACGCCGAAC GGATCAACATCTGCATCGGTTGTAATCAGGCCTGCCTTGACCACACCTTCGGCGGCAAGCTCACCAGTTGCCTGGTCAACCCGCGCGCCTGTCACGAGAC CGAGCTCAACTACCTGCCCACCCGGCAGGTGAAGAAAATTGCCGTGGTGGGTGCCGGTCCTGCCGGCCTGGCTGCTGCAACCGTTGCTGCACAGCGCGGA CATGAGGTGACGTTGTTCGATTCGGCCAGCGAAATCGGCGGCCAGTTCAATATCGCCAAGCGCGTGCCGGGCAAGGAAGAGTTCTCCGAGACGCTGCGTT ACTTCCGCAACAAAGTGGAAGAAACCGGCGTGCAGTTGCGCCTCGGCACTCGCATAAAAGCAGAAGACTTGCTGGGGGCCGGCTTTGACGAGGTGATTTT GGCAACGGGCATCGCACCGCGCACTCCTGCCATCCCAGGTATCGATAACCAAAAAGTGCTCAGCTATCTGGATGTCATTTTGCAGCGCAAGCCGGTCGGG CGCAGCGTGGCAGTGATCGGCGCAGGCGGTATCGGTTTCGATGTGTCGGAATTTCTCGTGCATCAGGGCGTGGCCACCAGCCTGGATCGTGAGGCGTTCT GGAAAGAGTGGGGCATCGATACCACGCTTGAAGCGCGCGGCGGCGTGGCCGGGATCAAACCTGATGTGCACGCCCCGGCACGCCAGGTGTACCTGCTGCA ACGCAAGAGTTCCAAGGTGGGCGACGGCCTGGGCAAGACCACCGGCTGGATTCACCGCACCGGGTTGAAAAACAAGCAAGTGCAGATGCTAAACAGTGTC CAGTACCTGAAAATCGACGATGCCGGGTTGCATATTCGCATTGGTGAAGACGGCGAGGAAAAGCTGCTGGCGGTAGATAACATTGTGATTTGCGCCGGGC AGGACCCGCTGCGCGAGCTGTATGACGATCTGGTCAGCGCCGGGCAAAGCGTCCATCTGATCGGCGGTGCAGACGTTGCCGCCGAGCTGGATGCCAAGCG CGCTATCGATCAGGGTTCGCGTCTGGCCGCTGCGCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGAGCTTGTCTGTAAACTGCGCGGATGATCGTTGACGCCCTTGACTGGCAGCCCACTGCTGCGCTGCAACGCTTGAACCTGCCCTGGCTGCAAGATGCC GGGGTCGAGGTGGCGATCCTGCGTCTTGACCTTATTGACTCGCTCATCAGCGGCAACAAATGGTTCAAGCTCAGCGAACACCTGACCCAGGCTGTAGAGG CGGGTGCAGAGGGATTGATCAGCCTGGGCGGCGCATACTCCAATCATCTCCATGCTCTGGCAGCAGCGGGCAGGCGCTTCGGTTTCCCGACGGTGGGCCT GTTGCGTGGTCACGCCCAGCAGACGCCGACGGTACTGGACCTGCAAGCTTTTGGCATGCAATTGCATTGGTTGGGTTATGCGGGTTATCGAGCACGACAT GCTGCGGATTTCTGGCTGCCCTGGCAGGCGCAATATCCTGAGCTGTATCCGATTGCCGAAGGCGGTGGCGGGCTTGCCGGTGCGCTGGGCTGCGCAAGGT
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| Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MTAAHYPHLLAPLDLGFTTLRNRTLMGSMHTGLEERPGGFERMAAYFAERARGGVGLMVTGGIAPNEEGGVYDGAAKLTNAEEAEQHRIVTRAVHEAGGK ICLQILHAGRYAYSRKQVAPSAIQAPINPFTPRELDEEGIEKQIADFVTCSTLARSAGYDGVEIMGSEGYFINQFLAAHTNHRTDRWGGSYENRMRLAVE IVTRVREAVGADFIIIFRLSMLDLVEGGSTWEEIVQLAKAVEQAGATLINTGIGWHEARIPTIATKVPRAAFSKVTAKLRGSVKVPLITTNRINTPEVAE RILSEGDADMVSMARPFLADPDFVNKAAAGHAERINICIGCNQACLDHTFGGKLTSCLVNPRACHETELNYLPTRQVKKIAVVGAGPAGLAAATVAAQRG HEVTLFDSASEIGGQFNIAKRVPGKEEFSETLRYFRNKVEETGVQLRLGTRIKAEDLLGAGFDEVILATGIAPRTPAIPGIDNQKVLSYLDVILQRKPVG RSVAVIGAGGIGFDVSEFLVHQGVATSLDREAFWKEWGIDTTLEARGGVAGIKPDVHAPARQVYLLQRKSSKVGDGLGKTTGWIHRTGLKNKQVQMLNSV QYLKIDDAGLHIRIGEDGEEKLLAVDNIVICAGQDPLRELYDDLVSAGQSVHLIGGADVAAELDAKRAIDQGSRLAAAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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