Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1627

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1627
Name
Replicon chromosome
Genomic location 1889915 - 1890346 (+ strand)

Cross-References

RefSeq YP_273870.1
GI 71733510
Entrez 3555797
INSDC AAZ33274.1
NCBI Locus Tag PSPPH_1627
UniParc UPI00005755B5
UniProtKB Acc Q48L55
UniProtKB ID Q48L55_PSE14
UniRef100 UniRef100_F3EBZ8
UniRef50 UniRef50_Q9HZM2
UniRef90 UniRef90_Q87YF4

Product

Feature Type CDS
Coding Frame 1
Product Name
biopolymer ExbD/TolR family transporter
Synonyms
Evidence for Translation
Charge (pH 7) -1.29
Kyte-Doolittle Hydrophobicity Value 0.056
Molecular Weight (kDa) 15.7
Isoelectric Point (pI) 6.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 262 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002600 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1627

Human Homologs

References

No references are associated with this feature.