Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0781

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF18657 YDG domain IPR041248 YDG domain 1089 1161 2.5E-16
Pfam PF18657 YDG domain IPR041248 YDG domain 1261 1333 7.9E-16
Pfam PF18657 YDG domain IPR041248 YDG domain 1175 1247 6.9E-16
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 67 422 1.2E-72
Pfam PF18657 YDG domain IPR041248 YDG domain 1347 1419 3.8E-16
Pfam PF18657 YDG domain IPR041248 YDG domain 1003 1075 6.9E-16
SMART SM00912 Haemagg_act_2a IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 64 177 1.6E-41
Pfam PF05860 TPS secretion domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 67 314 6.5E-35
PANTHER PTHR12338 AUTOTRANSPORTER - - 53 1379 1.5E-16
Gene3D G3DSA:2.160.20.110 - - - 525 822 5.6E-32
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 67 353 7.22E-43
Pfam PF18657 YDG domain IPR041248 YDG domain 923 989 7.9E-15
NCBIfam TIGR01901 JCVI: filamentous hemagglutinin family N-terminal domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 98 173 7.9E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.