Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0593

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 4 281 6.07E-58
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 22 212 1.8E-25
CDD cd03219 ABC_Mj1267_LivG_branched - - 7 278 2.38591E-107
Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal 263 287 1.4E-10
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 285 5.4E-58
PANTHER PTHR45772 CONSERVED COMPONENT OF ABC TRANSPORTER FOR NATURAL AMINO ACIDS-RELATED - - 2 289 2.7E-121
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 31 262 1.3E-8
FunFam G3DSA:3.40.50.300:FF:000317 Amino acid ABC transporter ATP-binding protein - - 5 285 4.5E-123

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.