Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0477
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACAAGCGCATCCTGATGGTCGATGGCGAACCAGTCCCGTATTGCCTAGCGCGCATCCCTGCCGCAGGTGAAACACGTGGCAACCTGGCCGCAGGCGGGCG TGGCGAAGCCCGTCCGCTGAGCGACAAGGACCGCTGGATCGCCGAGCAGATCGGCCCCACCCTGCGCGAAAAAGGCCTGTTGTTCGTCGGCCTCGACGTG ATCGGTGAGCACCTGACCGAAATCAACGTCACCAGCCCGGGCGGCATCCGCGAAATCGACAATGCTTTCGGCACCAATATTGGTGGCCTTTTAATAGATG CGATCGATAAGAAGCTGCAGGCGCGCAGGGGCTGATCAACGACTGACCCCGCTGGCCACGGATCAAACCGTGCGCCGCGGCGTCCCTTCGTCTGATCCGC AACAGAGCTTCGCCGTACATTGCGTTATCATGCGCCACCTGTAACACGACACGGATTTTGACATGCAGGCTGACGAGATGCTGAACCGCCAATGACATCC
|
|
| DNA Sequence for Gene |
>PSPPH_0477
ATGGCCAGAAACGACCTTCCCCTCGAACTCGCCAATGTGGGTGTGCGTCCTGCCGATCGCCTGGGCTTTACCATGATGATCGCGGCGCTGATCCACCTCG CGGTGATCCTTGGCGTGGGTTTCACCTATGTAAAGCCGGAGCAGATCTCGCAGACCCTGGAAATCACCCTCGCTACGTTCAAAAGTGAAGAAAAGCCTAA ACAGGCGGATTTCCTGGCACAGGACGATCAGCAGGGCAGTGGCACGCTGGACAAGGCCGAAACGCTCAAGACCACCGAACTGGCGCCGTATCAGGACACC AAGGTCAACAAGGTCACCCCGCCTCCGGCCAGCAAGCCGGTGGTCAAGCAGGAAGCGCCAAAGACTGCCGTCGCGACCACTGCGCCCAGCCAGCAGAAAA CCGTCGCCAAGCGCGATGAAGTCAAGCCCGAGCCAACCACCAAGGCCGCACCGACCTTTGACAGCTTGGAGCTGAGCAATGAAATTGCCAGCCTGGAAGC CGAACTGTCGACCGAGCAGCAGCTTTATGCCAAGCGCCCGAAGATCCACCGCCTCAATGCGGCCTCGACCATGCGCGACAAAGGTGCCTGGTACAAGGAC GACTGGCGCAAGAAGGTCGAGCGGGTCGGAAACCTGAACTATCCTGAAGAAGCACGACGCAAGCAGATCTACGGCAATTTGCGACTTCTTGTGTCAATCA ATCGCGACGGCTCGTTGTATGAAGTGCTGGTGCTTGAATCATCAGGGCAACCTTTGCTGGATCAGGCAGCACAACGAATCGTGCGTCTGGCGGCACCTTT TGCGCCGTTCACCGGCGATCTGGCCGACATCGACAGGCTGGAGATCATCCGCACCTGGAAATTTGCACGCGGCGACAAGCTGTCGAGTAATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ATTTTTTGCAAACTGACACTCGACACGTACAAGTGTCAGTTGTCAGGCGCGCAAGGCAACGCCAAACTAGGACTCATGAAAAAAGTCTCCCCGAGTTATC TAAAGCACCAGTTCCTGATCGCCATGCCGCACATGCACGACGAGAACTTTGCTCAGACCTTGACCTACGTTGTCGAGCACAACGCCAATGGCGCAATGGG GCTGGTGATCAACCGCCCGCAAAGCCTGACCCTGGCGGATGTACTCGAACAACTGCGACCGGAGCTTCCTGCGCCCAAACGCTGCCAGGAAATCGCCATA CATTCGGGTGGCCCGGTGCAGACCGATCGCGGCTTTGTCCTGCATCCCAGTGGCCAGACGTTTCAGGCCACAGTCAATCTTCCCGGCGGGATTTCGCTGT CGACCTCACAGGACGTGCTGTTTTCCATCGCCGATGGCTACGGGCCTGATCAAAATGTGATCACCCTCGGCTACGCAGGGTGGGACGCAGGCCAACTGGA
|
|
| Amino Acid Sequence |
>TonB domain-containing protein
MARNDLPLELANVGVRPADRLGFTMMIAALIHLAVILGVGFTYVKPEQISQTLEITLATFKSEEKPKQADFLAQDDQQGSGTLDKAETLKTTELAPYQDT KVNKVTPPPASKPVVKQEAPKTAVATTAPSQQKTVAKRDEVKPEPTTKAAPTFDSLELSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKGAWYKD DWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSGQPLLDQAAQRIVRLAAPFAPFTGDLADIDRLEIIRTWKFARGDKLSSN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|