Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0411
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGTGTGATAAGTACGCCTTCCCAGCTGGGCATCAGCGCGCTGGCGATGGTGAACAGCGATGCACAGAATAGCGCCATGACCATCACCGATTTGCGCCCC AGCCGGTCGGATATCGGTCCGGTGATCAGTAGGCCGATGGCGAGCATCGCCGTGGCGACGGACAGAATCAGGCTGCTCTGGGCTGCCGAAAGGGAGAACT CGCCGGACAGCGTTGGCATCATCGGCTGGACGCAATACAGCAGGGTGAATGTCGAGAACCCGCCAGCGAACAGCGCCAGTGCGGTGCGTTTGAAAAGCGG CGTATTTTTCTCGATGTAAGTGTCGCCAGACGGTTTAGCGGAGGCATTCAAGTCTGTGGTGGGCGGGGCGACGGCAGGATTCAAGGGAGACCTCGGAGCA CGATTGGGCAGGCAATGAAAAAATCATATAGCCCGCCAATCATTCCATCCAATATATTGTTCGACCTGTTTGATAGGTAAAACGACTTAATGGAGGCCGC
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| DNA Sequence for Gene |
>PSPPH_0411
ATGGAATTGCGCCATCTGCGTTACTTCATCGCGGTTGCCGAAGAGTTGCATTTCGGTCGTGCGGCACAGGCGCTAGGTATCTCCCAGCCGCCGCTGAGTC AGCAGATCCAGACGCTGGAGCAGGAGCTGGGCACGCGTCTGTTTGATCGCACCAACCGGCGTGTCGATCTGAGTGAATCCGGCAGGTTGTTTCTCGATGA GGCGCGGCTGGTGCTGGCGCAGGTCGATAAAGCCACTGATGTTGCCCGGCGTGCGCAACTGGGGGAAATCGGCGAGCTGAAGATTGGCTTTACTTCGTCG GCACCGTTCACTTCCAGCATTCCACAGGCAATTTTTGCCTTCCGTCAGGCTTATCCGGATGTGCACCTGACCCTGACCGAAATCACCAGCCAGGAAGTGG CAGCAGGGCTTGAGGACAAGACCATTCAGGTCGGCATCATGCGCCCGTTGGCGTTACCCGACTCATTGGTGGTGTTTGAGCTGCTGAACGAGCCGCTGGT GGCGATCATGCGTGCTGACCATCCACTGGCGGCAGAAAGCGAGAACGGGATCTATATGTCTGCCCTGGCCGCCGAGCCGTTCGTGTTCTTCCCGCGCACT TATGGCAGCGGCATTTACGCGCAGGTTCTGAGTCTGGCGCGCGCCGCGGGTTTCAGCCCGCTGATCACTCAGGAAGCGGGTGAAGTGATGACCATCATCG GCCTGGTGGCGGCTGGACTGGGCGTCACCGTGCTGCCAGCGTCCTACCGCCGAATGCGCATCGACGGCGTGGTCTATCGCAATGTCCTCGACCCCGGCGC GACAAGCGCGGTGTGGCTGGTACAGCGCAAGGACGAACAGTCACCGATGGCCAAGGCGTTTACCGAGCTTTTAACGCGCAATGTCGCACGATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGAGGTTATCGTTTCGCACGCTCCGCGTGGAAATGCCTGTCGTGACGCTCTGCGTCACAAATCTGCGCCGCGCCGCAGACTCAAGACCGGACGCAGAGC TTCCAGAACGGCATGCGACGTGGAGCGACGTACGAGAGTTGAGACGTGCGTGGCCTCACCCCCAGCGCTTGAATATCAATGACGTATTGACACCGCCAAA GGCAAAGTTGTTGTTCATCACATATTCGTTACTCATCCGCCGGGGTTCGCCGACGATGTAGTCCAGTTCGCCGCACTGTGAGTCGATGTCGACCAGATTC AGCGTATGAATGTAGCGGTCGCTATTGAGCATTTCGATACTGAACCAAGACTCCAGTGCGCCGCAGGCTCCCAGCGTGTGGCCGAGGAAGCTTTTCTGCG AGCTCAGTGGCATGCGCGGGCCGAACAGGCTGCTGGTGGCCAGGGTTTCGGCGATGTCGCCCTGTTCGGTGGCGGTGCCGTGACCGTTGACGTAACCGAT
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MELRHLRYFIAVAEELHFGRAAQALGISQPPLSQQIQTLEQELGTRLFDRTNRRVDLSESGRLFLDEARLVLAQVDKATDVARRAQLGEIGELKIGFTSS APFTSSIPQAIFAFRQAYPDVHLTLTEITSQEVAAGLEDKTIQVGIMRPLALPDSLVVFELLNEPLVAIMRADHPLAAESENGIYMSALAAEPFVFFPRT YGSGIYAQVLSLARAAGFSPLITQEAGEVMTIIGLVAAGLGVTVLPASYRRMRIDGVVYRNVLDPGATSAVWLVQRKDEQSPMAKAFTELLTRNVAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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