Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0391 (pilN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GGTCATGACGAGCTTACCGTGGCGGTGGTCGATATCGGCGCCACCATGACCACCCTCAGCGTGCTGCATCATGGCCGGATCATCTATACCCGCGAGCAAC TGTTCGGCGGCCGCCAGCTGACTGACGAAATCCAGCGCCGCTATGGCCTTTCCATGGAGGAGGCCGGGCTTGCCAAGAAGCAGGGCGGGTTGCCCGACGA CTATGTCAGCGAGGTGCTGGACCCCTTCAAGGATGCGTTGGTGCAGCAGGTCTCCCGTTCTTTGCAGTTCTTCTTTGCGGCCGGTCAATACAACTCCGTG GATCACATCATGCTGGCAGGCGGCACGGCTTCGATTTCAGGGCTGGAGCATTTGATTCAACGACGCATTGGCACCCCGACGATGGTCGCTAACCCGTTTG CCGACATGGCCCTGAGCTCCAAGGTCAATGCCGGGGCGCTGGCCAGTGACGCTCCCGCGTTGATGATCGCGTGCGGTCTGGCGTTGAGGAGCTTCGACTG
DNA Sequence for Gene
>PSPPH_0391 |pilN
ATGGCGCGGATCAACTTATTACCGTGGCGCGAAGAGCTTCGCGAAGAACGTAAAAAGCGCTTCCTGACCGCGCTGGTCGGCGTGTTGGTGGTGTCAGTCG GTATTCTGTTTCTGATTGATCGTTACGTCAGCAACGCCATTGAGCATCAGATGGCGCGCAACGCGTTTGTGCAGACGCAGATCGCTCAGCTCGATATACG CATCAAGGAGATCAGCGACCTGAAGGCGCGTCGCAAACAGTTACTTGAGCGCATGAAGATCATTCAGGACCTGCAAGGCAACCGCCCGATCACGGGGCGT GTATTCGATCAACTGGCGCGCACTCTTCCGGATGGCGTTTATTTCTCGCAGGTCAAAATGACCGACAAGCTGATTGCCATCAGTGGCGCTGCCGAATCGA ACAACCGGGTTTCCGACCTGATGCGCAACCTTGAAGCCTCTGACTGGCTGGAAGCGCCGAGCCTGACCGAAGTGAAGGCCACGACTGCAGGGGCCGTGGA TCAGGCCAACGTCTTTCAGTTGACAGTGCGTCAGACCCAGCCGCCGGTTGCCGCGGCTGCACCCGCTGCAACTACGCCTGCTACAGGAGCCAAGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATATGTCTGAATGGCTGGAAGGGCTTCGCAAGGTTGACCTGAGCGAGCTGGACCTGAACAACCTGGGTTCCTGGCCAGCAGCGGTCAAGGCCATTGCCGG CGTGCTGGTCGCGGTACTGATTTTCGCACTGGGCTACTTCTTCTTTATTCAGGACCTGGAAACCCAGCTGGAAAGCGCACAGAACAGTGAAGTGACGCTC AAGGAGCAGTTTTCCAACAAGGCCTTCCAGGCTGCCAACCTTGAGCCTTACAAGAAGCAGATGGAAGAAATGGAAAACACCTTCGGGGCCCTGCTGCGGC AATTGCCCAGCGACACCGAAGTGCCTGGCTTGCTTGAGGATATAACCCGGACCGGACTGGGAAGCGGGCTTGAGTTCGAGGAAATCAAGCTGCTGCCCGA GGCGGTCCAGCAGTTCTACATCGAGCTGCCGATACAGATCACGGTAGTCGGTGGTTATCACGACCTGGCAACCTTCGTCAGCGGTGTCGCCAGCCTGCCG
Amino Acid Sequence
>type IV pilus biogenesis protein PilN
MARINLLPWREELREERKKRFLTALVGVLVVSVGILFLIDRYVSNAIEHQMARNAFVQTQIAQLDIRIKEISDLKARRKQLLERMKIIQDLQGNRPITGR VFDQLARTLPDGVYFSQVKMTDKLIAISGAAESNNRVSDLMRNLEASDWLEAPSLTEVKATTAGAVDQANVFQLTVRQTQPPVAAAAPAATTPATGAKP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site