Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0246 (ompR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGTCATCCAGCTCACGCAGATAGCGCAGGCGTTCTTCCAGATGGCGCAATTGCGTGTCATCAAGACTGCCGGTCACTTCCTTGCGGTAGCGGGAAATG AAGGGCACGGTCGAGCCTTCATCCAGTAGTGCTACGGCCGCTGCGACCTGTTGTGGGCGTACGCCGAGTTCTTCGGCGATGCGGCTGTTGATGCTGTCCA TAAAACCACCTGGAGTTGTGAGCAAAAAACTGGGCTATGTACGAATTGCCTTGCCTGAATATCATCCGCCAGCATTTATTTTCAGCGCTGGCGAACCGCC ACAAGGCCAGCGTTGCCTGACTTTGAGGGCGGCGCATTATACCCGGCGAAGGCGGATTAGGGGATCGGCCGACAAATGTGGTCTTTTTTCGGCGAAAAAG CCTGCACAAGTGCCGCCTTCAGTAAAATCTGCTAACAATGCACAAGGTGCGCATCACCGCAGCTACGCCATAATGCGCCCCGAGATCAGAGGAGCATCCG
|
|
| DNA Sequence for Gene |
>PSPPH_0246
|ompR
ATGAGCAGCACCGCACAAAATGCTGAAGGCGAAAAAATCCTTATTGTCGATGACGATCCGGGGCTGAGCAGTCTCCTGGAACGTTTTTTCACCAGCAAGG GCTACCGGGCCCGCGCCGTGGCAAACGTGGAGCAAATGGACCGACTATTGGCCCGCGAGGTGTTCAACCTTGTGGTGCTGGACTTGATGCTGCCCGGAGA AGACGGCCTTTCAGCCTGCCGTCGTCTGCGAGCCGCGAACAATCAGGTGCCGATCATCATGCTGACCGCCAAGGGCGATGAGCTGAGCCGCATCAAGGGG CTCGAACTGGGTGCTGACGATTACCTGGCCAAGCCGTTCAACCCGGACGAGTTGATGGCGCGGGTCAAGGCTGTTCTGCGTCGTCAGGCTGCGCCTGTAC CCGGCGCGCCCGGCAGTGAAGACGAGTCGGTCAGTTTCGGCGACTACGAGCTGTCCCTGGCAACCCGCGAACTCAAGCGTGGCGACGTGGTGCACATGCT GACCACGGGTGAATTCGCGGTACTCAAGGCTCTGGTCATGCACGCTCGCGAGCCGCTGACCCGTGACAAGCTGATGAACCTGGCCCGCGGCCGGGAGTGG GATGCGCTGGAGCGATCCATCGACGTACAGATCTCCCGTCTGCGTCGCCTGATCGAGCCGGATCCTTCCAAGCCCCGCTATATCCAGACCGTCTGGGGCG TAGGCTATGTATTCGTTCCGGATGGTGCTGGTAATCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TAAGCCGGTTGTCAGCACAGAAGTCCGTCGTTCCCGCCAGTTACGTCGATAATCTCTTTCAAGGTTATCGGCGTACTGGTTTTTTGCGTTCGTCCATCGG GTCCGGCCCGCGTTCGGCAAACCTGCGAGCCTCGCTCGCCTTGCAAAGTGTATGGCTGCAGTTATGAAGACTCCGCTCTGGTTTCCGCAAAGCTTTTTCT CTCGCACGCTCTGGCTGGTGCTCATCGTCGTGCTGTTTTCCAAGGCCCTGACGCTGGTTTATCTGCTGATGAACGAAGACGTGCTGGTCGACAGGCAGTA CAGCCACGGCGTTGCGCTGACGCTGCGCGCGTATTGGGCTGCCGATGAAAACGATCGTGAGGCGATTGCCGAAGCGGCCGGTCTGATTCGGGTCGTAGGC GGTGGCGTGCCGGAAGGTGAGCAGCACTGGCCGTACAGTGAGATCTACCAGCGGCAGATGCAGGCCGAGCTGGGTGCCGATACGGAAGTGCGTCTGCGTG
|
|
| Amino Acid Sequence |
>osmolarity response regulator
MSSTAQNAEGEKILIVDDDPGLSSLLERFFTSKGYRARAVANVEQMDRLLAREVFNLVVLDLMLPGEDGLSACRRLRAANNQVPIIMLTAKGDELSRIKG LELGADDYLAKPFNPDELMARVKAVLRRQAAPVPGAPGSEDESVSFGDYELSLATRELKRGDVVHMLTTGEFAVLKALVMHAREPLTRDKLMNLARGREW DALERSIDVQISRLRRLIEPDPSKPRYIQTVWGVGYVFVPDGAGNR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|