Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0245 (tex)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TTCTCCGGGCAGCATCAAGTCCAGCACCACAAGGTTGAACACCTCGCGGGCCAATAGTCGGTCCATTTGCTCCACGTTTGCCACGGCGCGGGCCCGGTAG CCCTTGCTGGTGAAAAAACGTTCCAGGAGACTGCTCAGCCCCGGATCGTCATCGACAATAAGGATTTTTTCGCCTTCAGCATTTTGTGCGGTGCTGCTCA TCGGATGCTCCTCTGATCTCGGGGCGCATTATGGCGTAGCTGCGGTGATGCGCACCTTGTGCATTGTTAGCAGATTTTACTGAAGGCGGCACTTGTGCAG GCTTTTTCGCCGAAAAAAGACCACATTTGTCGGCCGATCCCCTAATCCGCCTTCGCCGGGTATAATGCGCCGCCCTCAAAGTCAGGCAACGCTGGCCTTG TGGCGGTTCGCCAGCGCTGAAAATAAATGCTGGCGGATGATATTCAGGCAAGGCAATTCGTACATAGCCCAGTTTTTTGCTCACAACTCCAGGTGGTTTT
DNA Sequence for Gene
>PSPPH_0245 |tex
ATGGACAGCATCAACAGCCGCATCGCCGAAGAACTCGGCGTACGCCCACAACAGGTCGCAGCGGCCGTAGCACTACTGGATGAAGGCTCGACCGTGCCCT TCATTTCCCGCTACCGCAAGGAAGTGACCGGCAGTCTTGATGACACGCAATTGCGCCATCTGGAAGAACGCCTGCGCTATCTGCGTGAGCTGGATGACCG GCGTGTCAGCATTCTTGCCAGCATTGAAGAGCAAGGCAAGCTGACCCCGGAGCTGGCTCGCGACATCAAGCTGGCCGACACCAAGACCCGCCTTGAAGAT TTGTACCTGCCTTATAAGCAGAAACGTCGCACCAAGGGCCAGATCGCCCTTGAAGCCGGTCTGGGCGAGCTGGCTGACGGCCTGTTCAACGACCCGAGCC TCGCTCCTGAAACCGAAGCAGCCCGTTTTGTCGACGCCGAGAAAGGCGTGGCCGATGTCAAGGCTGCGCTGGAAGGCGCCAAGTGCATCCTGATGGAACG CTTCGCCGAAGACGCATCGTTGCTCGACAAGTTGCGCAGCTTCCTCAAACAGGAAGCAGTAATCAGCGCACGCGTGGTGCCGGGCAAGGAAGAGGAGGGT GCCAAGTTCCGCGATTATTTCGAACACGACGAGCCACTCAAGAGCATGCCTTCGCACCGTGCACTGGCGATTTTCCGCGGCCGCAACGAAGGTTTTCTCA GCTCCGCACTGAAAGTCGGTGAAGAACTGCCGGGTGCCATGCACCCTTGCGAACTGATGATCGGTGAACGCTTCGGCATCCAGAACCAGAACCGCCCCGC AGACAAATGGCTGGCAGAGGTGGTGCGCTGGACCTGGAAGGTCAAGTTGTACAGCCACCTGGAAACCGACCTGCTGGGCGAGCTGCGCGACGGCGCGGAG ACCGAAGCCATCAACGTTTTCGCCCACAACCTGCACGACCTGCTGCTCGCCGCCCCGGCTGGCCAGCGCGCCACACTGGGTCTGGACCCGGGCCTGCGCA CCGGCTGCAAGGTCGCTGTGGTGGACGCAACCGGCAAGCTGCTCGACTACGCGACCGTTTACCCGCATGTGCCGAAGAACCAGTGGGATCAGACCATTGC TGTGCTGGCTGCCCTGTGTGCCAAGCACTCGGTCGACCTGATCGCTATCGGCAACGGCACCGCCAGCCGCGAAACCGACAAGCTCGCCGCTGACCTGATC AAAAAATACCCAGGTCTGAAAATGACCAAGGTCATGGTTTCCGAAGCAGGCGCATCGGTTTATTCCGCGTCGGAACTGGCCGCCAAGGAATTCCCGGACC TCGACGTATCGATCCGTGGCGCGGTCTCGATTGCCCGTCGCTTGCAGGACCCGCTCGCCGAACTGGTGAAAATCGATCCCAAGTCCATCGGTGTCGGTCA GTATCAGCATGACGTCTCGCAGCTGAAACTGGCGCGCGGCCTGGACGCGGTGGTTGAAGACTGCGTGAACGCTGTGGGCGTGGACGTGAACACCGCTTCG GTGGCGTTGCTGGCGCGGATTTCCGGGCTTAACACCACACTGGCGCAGAACATCGTTGCGCATCGCGATGAAAACGGCGCGTTCAAGACGCGTGCAGCGC TGAAGAAAGTCAGCCGTCTGGGCGAAAAGACCTTTGAACAGGCAGCAGGCTTCCTGCGCGTGATGACCGGTGACAACCCGCTGGACTCTTCTGCCGTTCA CCCGGAAGCCTATCCACTGGTGCAGCGTATTGCGGCAGAAACCGACCGCGATATTCGCTCGTTGATTGGCGATGCGAGCTTTCTCAAACGCCTGGACCCG AAGAAATTCACCGACGAGACCTTTGGTCTGCCAACTGTGACCGACATTCTGCAGGAACTCGAAAAACCGGGTCGCGACCCGCGTCCGGAGTTCAAGACGG CAGAGTTTCAGGACGGTGTCGAAGAACTCAAGGACCTGCAACCGGGCATGATTCTCGAAGGCGTGGTCACCAACGTCACCAATTTCGGTGCGTTCGTCGA TATCGGCGTGCATCAGGACGGTCTGGTACACATCTCGGCATTGTCCGAGAAGTTCATCAAGGACCCGCGTGAGGCGGTCAAGGCCGGTGATGTGGTGAAA GTGAAGGTCATGGAAGTCGACATTCCGCGCAAACGCGTCGGCCTGTCGATGCGCATGAGCGACACGCCCGGCGAGAAGGTCGACGGTGCACGCGGTGCAC GCCCAGGTTCCTCGCCTCGCCAGCAGAACAGCGCTCCACGCAAGGAAACCACAGCACCCGCGCCCATCAACAACGCAATGGCTTCGCTGTTTGCCAATGC CAAGCAGTTGAAGAAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGATATTCCTGAAGATCTGACCCAAAGTGCCTACTTCAAGATGCTCGGCTGCGAACTGCGGCGTCTGGACGAGGGCGTGGCGGAGGTTGCGTTGCCGCT GGAGGCGCATCTGCGCAATCGCGGCAACGTGATGCACGGCGGGGCAATCTTCAGTCTGGTCGATATCGCCATGGGGCTGGCCTGCTCCAGCTCCCACGGT TTCGACCAGCGCAGTGTCACCATCGAGTGCAAGATCAACTATGTGCGCGGCGTCTCCGATGGCGAGGTGTTATGCATCGCCAAGGTGCTGCACGCGGGCC GCAGGACGCTGGTCGTCGAGGCGGAAGTCGTTCAGGGCGATAAACTCGTCGCCAAAGCCCAGGGCACATTCGCAGTCATCTAGACTGCAATAAAGGCTGA TGAAAGCAATCACTGTGAACAGAACCTAGCCGTATCGACATCATTTAGGTTAATTTCGGCACCATTAGCGTGGTGCCGAGTCCATTTGGGTGGTACGACA
Amino Acid Sequence
>S1 RNA-binding domain-containing protein
MDSINSRIAEELGVRPQQVAAAVALLDEGSTVPFISRYRKEVTGSLDDTQLRHLEERLRYLRELDDRRVSILASIEEQGKLTPELARDIKLADTKTRLED LYLPYKQKRRTKGQIALEAGLGELADGLFNDPSLAPETEAARFVDAEKGVADVKAALEGAKCILMERFAEDASLLDKLRSFLKQEAVISARVVPGKEEEG AKFRDYFEHDEPLKSMPSHRALAIFRGRNEGFLSSALKVGEELPGAMHPCELMIGERFGIQNQNRPADKWLAEVVRWTWKVKLYSHLETDLLGELRDGAE TEAINVFAHNLHDLLLAAPAGQRATLGLDPGLRTGCKVAVVDATGKLLDYATVYPHVPKNQWDQTIAVLAALCAKHSVDLIAIGNGTASRETDKLAADLI KKYPGLKMTKVMVSEAGASVYSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARGLDAVVEDCVNAVGVDVNTAS VALLARISGLNTTLAQNIVAHRDENGAFKTRAALKKVSRLGEKTFEQAAGFLRVMTGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDASFLKRLDP KKFTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQDGVEELKDLQPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVK VKVMEVDIPRKRVGLSMRMSDTPGEKVDGARGARPGSSPRQQNSAPRKETTAPAPINNAMASLFANAKQLKKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site