Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0210 (radC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGATGGCGACGGTGGCATCGGTTGCCAGCACGATGGTGGTCAGCAAGTCGTTGGCGATGCCTTGCGCCAGGCGCGCGATCAGGTCGGCGGTGGCCGGAG CGATCAGGATCAGGTCGGCCCATTTGGCCAGTTCGATATGGCCCATCGCGGCCTCTGCGGCCGGGTCGAGAAGGTCCAGGTGCACAGGGTGCCCGGACAG GGCCTGCATGGTCAGCGGCGTAATGAACTCTGCTCCGCCTTTGGTCATGACGACACGCACTTCAGCGCCCTGATCGCGCAGGCGGCGGACCAGCTCGGCG CTCTTGTAGGCCGCGATGCCGCCGCCGACGCCAAGAACGATGCGTTTTCGATACAGCCGCTGCATAGACCTGCCTTTTTGGTCGAGTGAATACGCGACGC CCATGACGCCTCCCCAGGCCAGGCCGTCGCGCAAAAAAGATGGGCTAAGATAGCACAGCGACTGCACCGCAACAGCGGTGCCCAATCACATGGAGGTGCT
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| DNA Sequence for Gene |
>PSPPH_0210
|radC
ATGAGTATTCGCAGTTGGCCCGCGGCCGAACGCCCGCGGGAACGCTTGTTGGAGTTGGGAGCGGGGAGCCTTTCCGACGCCGAGTTGCTGGCTATCTTTT TACGCACTGGGGTGGCCGGAAAAAGCGCCGTAGACCTTGCCCGTCATCTTCTGAATCAATTCGACGGGCTCAGATCGTTACTGGATGCTGACCTGTCCAC GTTTACCTCCCAACTCGGGCTGGGGCCTGCCAAATTTGCTCAGTTGCAGGCTGTCATGGAGATGGCGCGCCGGCACATGGCCGAGTCCTTGCGCCGTGAC TCAGCGCTGGAAAACCCCACTCAGGTGCGCAACTACCTGAAGGCTCAGCTCAGACATGAACAGCATGAAGTTTTCGCCTGCCTGTTTCTGGACAACAAAC ACCGGGTCATGACCTTCGAGATACTGTTTCGCGGGACGATCAACGCCTCCTATGTGCATCCGCGCCAGGTGGTGAAGCGAGCGATGGCTCACAACGCCGC CAGCCTGATCCTCTGCCACAACCATCCTTCCGGCATCACCACGCCCAGCCGTTCCGACATAGACCTGACCAAGCGCCTCAAGGAAGCACTGATGCTGGTG GATGTTCATGTGCTGGACCACGTGATCGTGGGCGACGGCGAGCCACTGTCGATGGTCGAGCGCGGGTTGATGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCTCACGCGGGAACGATAGGGCGGGATTCGGCTTATCGTTCCCGCTCTCTGCGTGGTAATGCCGTTCTGGACGCTCTGCGTCCGGTCTTGTGGTGGGGC GTGCCAATGCAGGGCATTGGCACGCCAGTTACGCAGACGGGCCTAGGTCTGGCGATTTACTTGACCTGCACCTTGTAGAAATCCTGCCTGCCAAACGGGC TGACCTGATAACCCGTGACGTCCTTGCGTACCAAGGCTGCTGCGGTCGGGTGGGCGAGGGGTATCCACAGTGCCTGCTGTTGGATCTGTTGTTGCGCCGA ATGGTACAGCTTGCTGCGTTCGCCCTGATCGCTGACGGACTTACCGTCGGTGATGAGCTTGTCCAGCGTCTTGTCGCAATAGCGGGCAAAGTTGGTGCCT GACTGCACGGCAGCGCAGGAAAACTGCGGCGTCAGGAAGTTATCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAGGTCATGTTCACCGGCCT
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| Amino Acid Sequence |
>DNA repair protein RadC
MSIRSWPAAERPRERLLELGAGSLSDAELLAIFLRTGVAGKSAVDLARHLLNQFDGLRSLLDADLSTFTSQLGLGPAKFAQLQAVMEMARRHMAESLRRD SALENPTQVRNYLKAQLRHEQHEVFACLFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDIDLTKRLKEALMLV DVHVLDHVIVGDGEPLSMVERGLM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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