Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0129 (clpB1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TTCAGCTACTTCTCGGGGATGTTCGCCCAGAAGCCGCGCAACGCCCTGAACCTTGAAGTCATGCTGAGTTTTTATTTCTCGCTGCCGTTCAAGATCCAGC AGTTCGCCGGGCGCTGGCTGAAGCTCGACAGCAGCCAGTGCACGCAGTTGGGCCGCAAGAACGCCGTGCTAGGGCAGAGCGCCGTGGCTGGCAATCGCGT CTGGGATTACCAGTCGTGCGTACGTATCGAAATGGGGCCTCTGGAACTGGCTGACTACCAGCGCTTTCAGCCGGGCACCGAGGATTACCAGAAGCTTGTT GAGCTGGTGCGTTTTTACATCGGCGCCGAACTGGACTTCCAGATTGCGCCGAAGCTCAAGCGCGAAGCTGTACCCGTGGCCCGCTTGGGCCGCCAAGGCA ATGTATCGCTGGGCTGGCTTGGCTGGCTCAAACGCCCCGGTGTCGACGTGGAGCCCTCCCGTTGCGCTGTTTTCCATATTCCTTTTGATGGGGTCTCCCT
DNA Sequence for Gene
>PSPPH_0129 |clpB1
GTGAACCTGAAGTCCCTGTTCGCCAAGCTGAACGAAACGAGCCGCACTGCCACTGAAAGCGCTGCTGCGCTGTGCCTGTCGGAGAACCACTACGACGTTG AAGTCGAGCACTTGCTGCTGCAATTGCTCGACAACAACGATAACGACCTGCCGGTGATCCTGCGCCACTACGACGTAGTGCCTGATCGCCTGCAAGCACA GCTGGTCACCGCGCTGGGGACGTTCAAGAAAGGCAACACACGGACGCCTGCGCTCTCGCCGCACATCACGCGCATGATCGAGCAGGCCTGGGTACTGGCG TCGATCGAATTCGGTCAGTCGCAGATCCGCACCGGCCACCTGATTCAGGCCTTGCTGGATGACGATGCCCTGCGCCGCGTGGTCATCGGTTCGGCGCCGG AACTGGAGAAAATCAACGCTGACGACCTGCGCCTGAATATGAGCGCGCTGGTCGAAGGCAGCCCGGAGACCAAACTGAGCAAGCCTCTGGCCAACGCCGA CGCAAGCACGGGCGCAACCACCAAGGGCAACGGCAAGCCCCCTGCCCTGGACCAGTACACCGTCAACCTGACCCAGAGCGCCCGCGATGGTCGTATCGAT CCGGTACTGGGACGCGAGTTCGAAGTGCGGCAGATGGTCGACATCCTGACCCGCCGCCGTCAGAACAACCCGATCCTGACTGGTGAAGCGGGTGTGGGTA AAACAGCCGTGGTGGAAGGTCTGGCGCTGCGCATCGTGCAGGGCGACGTGCCTTCGGTGCTCAAGGGCGTCGCCATTCACACCCTGGATCTGGGCCTGTT GCAGGCCGGTGCAGGGGTCAAAGGCGAGTTCGAAAACCGCCTCAAGTCGGTCATCGAAGAAACCAAGCGCAGCCTGCACCCGATCATTCTGTTCATCGAC GAAGCCCACACGTTGATCGGCTCGGGTGGCCAGGCCGGGCAGAACGACGCAGCGAACCTGCTCAAGCCTGCCTTGGCGCGTGGCGAGCTGCGCACCATCG CCGCCACTACATGGGCAGAATACAAAAAGTATTTCGAAAAAGACGCCGCATTGGCTCGACGCTTCCAGGTCGTGAAAGTCGAAGAGCCTGACGAAGACAA GGCCATCCACATGCTTCGTGGGCTGCTGGCGAAGATGCAGGAGCATCACAAGGTCACCGTGATGGACGAAGCGCTGGTGCAGGCCGTACGCCTTTCCAAT CGCTACATCACCGGCCGCCAATTGCCGGACAAAGCCGTCAGCGTGCTGGACACCGCTTGCGCACGCGTCGCGCTGGGCCAATCGGCGCAGCCAGGCGCGC TGGAAGACTGCAAGCGCCACATCGACAACCTGAATGCAGAAATCACCGTGCTGGAGCAGGAAACCGCCAAGGGCAGCGACCACGCTCGCCGTTTGACGGC CCTGCACGAAGAGCTGAAAGCCGAACAGGAAACCCGCGAGTCGCTGGAGCAACAGTGGAAGCGCGAGCTGGAACTGGTCGAAAAGCTTGGCGCACTCAGC GTTCCGGAAGACGGCGCGCCTGATGCTGAGCAGATCGCTGCAGTGCGTGCCGAACTGGCCAGTGTGCAGGGCGAGCAACCGCTGGTCCACGCGCTGGTAG ACGGCGGCACCATCGGTGAAGTGATTTCCGGCTGGACCGGTATCCCGCTGGGCAAGATGCTGCGCGACGAGATCGATACCGTACAAAGCCTGCCGGCGCT GTTGGGTGAACGCGTACTGGGGCAGGATCATGCGCTTGAAGAGATCGGCAAGCGCATCAAGATTTCCCGCGCGCGCATGGAAGACCCGAACAAGCCGATC GGTGTGTTCCTGCTGCTCGGCCCGAGCGGTGTCGGCAAGACCGAAACTGCGCTGGCGCTGGCTGACACACTGTATGGCGGCGAGCGTAACGTCATCACCA TCAACATGTCCGAATACCAGGAAGCCCACACAGTCTCCAGCCTCAAAGGCTCCCCGCCGGGCTACGTCGGTTATGGCGAAGGTGGCGTGCTGACCGAAGC CGTGCGCCGCAAGCCTTACAGCGTGGTGCTGCTCGACGAGGTGGAGAAAGCCCACCCGGACGTGCTCGAGCTGTTTTTCCAGGTCTTCGACAAAGGCGTG CTGGACGATGGCGAAGGTCGCGAGATCAACTTCCGCAATACCGTGATCATTCTCACCTCCAACACCGGTACTGATCGCATCATGCAGTGGTGCCTGAACA CCGAGCAGAAGCCAACCCCCGATGACATCGTGGAAGGCCTGCGCGACGAGCTGAATCAGGTGTTCAAACCTGCGTTCCTCGGTCGCTTGACCATCGTGCC GTACTACCCGGTTCAAGACGCGATTCTGGAACGCATTGTCGGCCTGAAACTTGAGCGCATCCGCAAGCGTTTCGAGCGCAATCACCAGGCAGTGCTGCGT TACGACGAGGCGCTGATCAAGGCCATCGCATCGCGTTGCACGGAAGTCGACAGCGGCGCACGCAACATCGACAACATCCTGTCCAAAACCCTCATGCCGG AACTCGCCCAGCGAGTGCTGGAGCGGATGGCGCAGGACAAGCCGATTCAGAGCCTGACCATCGATCTGGGCAGCGATGGCGACTTCGCTTACACACTGAC CTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGATCACCCCATAGGTAAGACGTGATGAATAAAAGACTTCAAGGCAATTGTTCCTCGAAGCCAGCCTTGGCAAGGTGCCTGGCTGTTCTGGCAATGATG CTGGCTCTGTCCGCCTGTGGCGTGACGGACCGTGTCGCCAAGCGCATGGATGACACCTGGGCTGGCGACATGATGTTTGGTGACAACGAAAAGGTCATCC TGACGACTGACGGCGGTAATCAGCTCAACCCTGACGAGTACGGCAAACCGCTCTCGGTGGTGGTGCGCGTTTATCAACTGTCCTCTCTGGAGCGCTTCGA GTCAATCAACGCCGACACCCTCTGGGATGATCCGCAAAAGGCTCTGGGCAACACACTGGTCGAAAGCAGAGAGCTGATTCTGTTGCCTGGCATAGGCGAG ACCGATCAATGGCCGCTGAACCCGAATGCCTCGTATGTGGGCATCGCGGCGTTCTTCCGCACCGACGTCGACAGCCGCTGGAAGGTCGCGTTCGACGCCA
Amino Acid Sequence
>ATP-dependent Clp protease ATP-binding subunit
MNLKSLFAKLNETSRTATESAAALCLSENHYDVEVEHLLLQLLDNNDNDLPVILRHYDVVPDRLQAQLVTALGTFKKGNTRTPALSPHITRMIEQAWVLA SIEFGQSQIRTGHLIQALLDDDALRRVVIGSAPELEKINADDLRLNMSALVEGSPETKLSKPLANADASTGATTKGNGKPPALDQYTVNLTQSARDGRID PVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLALRIVQGDVPSVLKGVAIHTLDLGLLQAGAGVKGEFENRLKSVIEETKRSLHPIILFID EAHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPDEDKAIHMLRGLLAKMQEHHKVTVMDEALVQAVRLSN RYITGRQLPDKAVSVLDTACARVALGQSAQPGALEDCKRHIDNLNAEITVLEQETAKGSDHARRLTALHEELKAEQETRESLEQQWKRELELVEKLGALS VPEDGAPDAEQIAAVRAELASVQGEQPLVHALVDGGTIGEVISGWTGIPLGKMLRDEIDTVQSLPALLGERVLGQDHALEEIGKRIKISRARMEDPNKPI GVFLLLGPSGVGKTETALALADTLYGGERNVITINMSEYQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGV LDDGEGREINFRNTVIILTSNTGTDRIMQWCLNTEQKPTPDDIVEGLRDELNQVFKPAFLGRLTIVPYYPVQDAILERIVGLKLERIRKRFERNHQAVLR YDEALIKAIASRCTEVDSGARNIDNILSKTLMPELAQRVLERMAQDKPIQSLTIDLGSDGDFAYTLT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site