Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGCATAACAGATGGTCGGGCCGACAAACGTGAAGCCGGCCTTTTTCAGCGCCTTGCTCATCGCTTCGGCCTCGGCGGTAATCGCCGGCACTTCGCTGCGA TCCTTGAAATGGTTGATCTTCGGCTCGCCACCAACAAACGACCAGAGCAGACCGGCCGGGTCTTGCAGCGCCAGCCAGGCCCGCGCATTGGTGCGCACGG CCTTGAGCTTGAGGCGATTGCGGATAATGCTCGGATCGAGCATCAGCGCCTCTATTTCGGCATCGCTCAGCTGCGCCAGGCGCACGACGTCAAAGCCGTG CAGCACTTCGCGATAACGCGCCCGCCGCTTGAGAATCGTGATCCACGACAGCCCGGCCTGGAACCCTTCGAGCAAAAGCAACTCGAAGAGCTTCTGCGCA TCGCGCAGCGGCACTCCCCACTCCTGATCGTGATAAGCGATGTACAGGGGGTCTTCGTTGCACCAAAAGCAGCGTGTCATAGGGCTCCCAAGGAGTGGAC
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DNA Sequence for Gene |
>PSPPH_0012
|glyQ
GTGCGGCCGAATCGGGTATACTCCCGCTCTTTGAATCGCAGCCCAGCACAGGTGAAATTTGTGAGCCAGCCTACGCCAGCCGTGCGTACCTTCCAAGACT TGATCCTCGCCCTCCAGCAATACTGGGCAGAACAAGGTTGCGTGGTACTTCAGCCCTACGATATGGAAGTAGGCGCCGGCACGTTCCACACTGCCACGTT TCTGCGCGCCGTAGGCCCGGAAACCTGGAACGCCGCTTACGTACAGCCAAGCCGTCGCCCGACTGACGGCCGCTACGGCGAAAACCCGAACCGCCTGCAG CATTACTATCAGTTCCAGGTGATTCTCAAGCCCAACCCGGACAACTTCCAGGAACTGTACCTGGGTTCGCTTAAGCACATCGGCCTCGATCCGCTGGTGC ACGACGTGCGTTTCGTCGAAGACAACTGGGAATCGCCGACGCTGGGCGCCTGGGGTCTGGGCTGGGAGATCTGGCTCAACGGTATGGAAGTCTCGCAGTT CACCTACTTCCAGCAGGTCGGCGGCCTTGAGTGCTACCCGGTTACCGGCGAAATCACTTACGGCCTTGAGCGTCTGGCCATGTACCAGCAGGGCGTGGAC TCGGTCTACGATCTGGTCTGGGCTGACGGCCCGTTCGGCAAAGTGACTTACGGCGACGTGTTCCATCAAAACGAGGTAGAACAGTCGACCTACAACTTCG AACACGCCAACGTCGACAAACTGTTCGAACTGTTCGATTTCTATGAGAGCGAAGCCGCACGTCTGATCGAGCTGGAGCTGCCGTTGCCGGGCTATGAAAT GGTCCTCAAGGCCTCGCACACCTTCAACCTGCTGGATGCCCGCCGCGCGATTTCCGTGACCGCGCGTCAGCAATACATCCTGCGCGTGCGCACGCTGGCC CGCTCGGTGGCTCAGGCCTACCTGCAGGCCCGCGCCCGTCTCGGTTTCCCGATGGCGCCGCCCGATCTACGCGATGAAGTGTTGGCCAAGCTGGAGGCAG CGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGCTCAAGATTTTCTGGTTGAACTGGGCACTGAAGAACTGCCACCCAAGACCCTCGTTTCCCTGGCAGATGCATTTCTGGCCGGTATTGAAAAAGGCCT GTCGGGCGCAGGTCTGACCTACAGCGCCAAACAGGTCTACGCTGCACCGCGTCGCCTGGCCGTGCTGATCACCGCGCTGGCCACACAACAGCCGGATCGC AGCGTCAACCTCGACGGCCCACCGCGTCAGGCAGCCTTCGATGCGGACGGCAACCCGACGCAGGCAGCACTGGGCTTCGCCAAGAAGTGCGGCGTCGACC TGAGCGAAATCGATCAGAGCGGCCCGAAACTGCGCTACAGCCAGACCATCCTCGGCAAGCCGACCACGTCGCTGCTGCCAACCATTGTCGAAGACTCGCT GAACGACCTGCCGATTGCCAAGCGTATGCGCTGGGGTGCCCGCAAGGAAGAGTTCGTGCGTCCGACCCAGTGGCTGGTGATGCTGTTCGGTGATCAGGTG
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Amino Acid Sequence |
>glycyl-tRNA synthetase subunit alpha
MRPNRVYSRSLNRSPAQVKFVSQPTPAVRTFQDLILALQQYWAEQGCVVLQPYDMEVGAGTFHTATFLRAVGPETWNAAYVQPSRRPTDGRYGENPNRLQ HYYQFQVILKPNPDNFQELYLGSLKHIGLDPLVHDVRFVEDNWESPTLGAWGLGWEIWLNGMEVSQFTYFQQVGGLECYPVTGEITYGLERLAMYQQGVD SVYDLVWADGPFGKVTYGDVFHQNEVEQSTYNFEHANVDKLFELFDFYESEAARLIELELPLPGYEMVLKASHTFNLLDARRAISVTARQQYILRVRTLA RSVAQAYLQARARLGFPMAPPDLRDEVLAKLEAAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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