Pseudomonas syringae pv. tomato DC3000, PSPTO_5434
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR37024 | TYPE VI SECRETION SYSTEM DUF2094 AND IMPA-RELATED DOMAIN PROTEIN | - | - | 1 | 493 | 8.6E-130 |
| Pfam | PF06812 | ImpA, N-terminal, type VI secretion system | IPR010657 | ImpA, N-terminal | 17 | 127 | 1.4E-29 |
| NCBIfam | TIGR03362 | JCVI: type VI secretion system protein TssA | IPR017739 | Type VI secretion system-associated, VCA0119 | 12 | 484 | 0.0 |
| Pfam | PF16989 | Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ | IPR017739 | Type VI secretion system-associated, VCA0119 | 225 | 483 | 2.3E-82 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.