Pseudomonas syringae pv. tomato DC3000, PSPTO_5425

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00382	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00004	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pst02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pst03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Coils	Coil	Coil	-	-	417	437	-
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	203	348	1.6E-10
NCBIfam	TIGR03345	JCVI: type VI secretion system ATPase TssH	IPR017729	AAA+ ATPase ClpV1	13	870	0.0
Pfam	PF02861	Clp amino terminal domain, pathogenicity island component	IPR004176	Clp, repeat (R) domain	26	73	0.0059
CDD	cd19499	RecA-like_ClpB_Hsp104-like	-	-	577	785	1.33163E-80
Gene3D	G3DSA:1.10.1780.10	-	IPR036628	Clp, N-terminal domain superfamily	5	152	3.2E-24
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	569	785	6.9E-66
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	165	493	8.67E-71
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	792	859	7.7E-10
SMART	SM01086	ClpB_D2_small_2	IPR019489	Clp ATPase, C-terminal	787	879	1.8E-5
Coils	Coil	Coil	-	-	449	469	-
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	154	347	4.4E-72
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	208	339	2.6E-10
PANTHER	PTHR11638	ATP-DEPENDENT CLP PROTEASE	-	-	17	870	0.0
SUPERFAMILY	SSF81923	Double Clp-N motif	IPR036628	Clp, N-terminal domain superfamily	17	122	8.04E-11
FunFam	G3DSA:3.40.50.300:FF:000010	Chaperone clpB 1, putative	-	-	154	347	1.1E-85
Gene3D	G3DSA:1.10.8.60	-	-	-	788	880	6.6E-8
FunFam	G3DSA:3.40.50.300:FF:000025	ATP-dependent Clp protease subunit	-	-	569	785	7.3E-82
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	694	712	2.0E-34
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	727	741	2.0E-34
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	348	563	2.0E-44
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	620	638	2.0E-34
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	616	781	2.2E-42
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	565	853	6.69E-57
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	348	440	1.5E-28
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	616	766	3.3E-9
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	665	683	2.0E-34
CDD	cd00009	AAA	-	-	188	339	1.03239E-15
Coils	Coil	Coil	-	-	473	493	-

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.