Pseudomonas syringae pv. tomato DC3000, PSPTO_5263 (katE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGACCACGATCTGCCCGCCGCTTGGGGTCTCGAGGCGGTTGATCAGGCGCAGCAGCGTGCTTTTGCCAGCACCGGAATGGCCGATGATGCCAAACACCTG GCCGTCGTCGACGCGCAGGTTGGTGGGGTGCAGGGCCGGTATTTCCTTGCCTGCCACCCGATAGGTTTTGTGGACGTTATGAAACTCGATCACGGAGCGA ACCTTGTGGGGGCGCGTTAAAAAATCAGCGCAGTGGCAGGACGCCACTTGCTTCGTTACCTCGGCCAGATTGAGCCGGGCGCGCATTTTAGCCTGTCCGG CCGACTGTGCTTAGCATTTATTTGTAGGCTGTCCTGTGCAACGGGCATAACGCGACCGCTGATGCCAACGACTGCAAATCCGACTGAACGGCTGTTTATA CGGCCGGTCACTTTCTGGATACCGTGATTTCCCGCTTACGGCAGGGAAGTCGTATTCAGCGAACCCAACTCAACGATTGGGTCGAGATAAGGAGTTTCTG
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| DNA Sequence for Gene |
>PSPTO_5263
|katE
ATGGCTAGCAAGAAAGCACCACCTGCGACCGATACGTCAAAAAGCCAGATGGCCGGCACTGATACACCGGACCGCGGCAACACCAACGCCAAGCTGGAGA GCCTCGAGCAATTTCGCTCGGACGCCACCGGCCAGGCGCTGCGCACCAACCACGGCGTAAAAATCTCTGATAACCAGAACACCCTTAAAGTCGGCAGCCG TGGCCCTTCGCTGCTTGAAGACTTCATCATGCGTGAAAAAATCACGCACTTTGACCATGAGCGTATCCCGGAACGTATTGTTCACGCCCGCGGCACCGCA GCCCATGGCTATTTCCAGACGTATGAAAACCACGGCGCACTCAGCAAGGCGGGTTTTTTGCGTGATCCGGCCGAGAAAACGCCGGTTTTCGTGCGTTTCT CGACTGTTCAGGGGCCACGTGGCTCGGGCGATACCGTGCGCGATGTGCGTGGTTTTGCGGTCAAGTTCTACACCGGCGAAGGCAACTTCGACCTGGTGGG CAACAACATGCCGATCTTCTTTATTCAGGACGCGATCAAGTTTCCCGACTTCGTGCACGCGGTAAAACCTGAACCGCACAACGAAATCCCGACTGGCGGC TCGGCGCACGACACCTTCTGGGACTTCGTCTCGCTGGTGCCGGAATCTGCACACATGGTGCTGTGGACCATGTCCGACCGCGCGATCCCGAAAAGCCTGC GCACCATGCAGGGCTTTGGTATCCACACCTTCCGCCTGATCAACACCGAAGGTAAATCCAGCTTCGTCAAATTCCACTGGAAGCCCAAGTTCGGCGTGTG CTCGCTGGTCTGGGACGAGGCGCAGAAGCTGGCCGGCAAGGACACTGATTTCCACCGCCGCGACCTGTGGGAGTCCATCGAGATGGGCGACTACCCGGAA TGGGAACTGGGCGTGCAGATCGTTGCCGAGGAAGACGAGCACAAGTTCGACTTCGACCTGCTCGATCCGACCAAGATCATCCCGGAAGAACTGGTGCCGG TCACTCCGCTGGGCAAAATGGTGCTGAACCGTAACCCGGACAACTACTTTGCCGAGACCGAGCAGGTTGCCTTCTGCCCGGGCCACATCGTGCCAGGCAT CGACTTCTCCAATGATCCGCTGCTGCAAGGTCGCCTGTTCTCTTACACCGACACGCAGATCAGCCGTCTTGGTGGCCCAAACTTCCACGAGATCCCGATC AACCGTCCGATTGCGCCGAACAACAACGGTCAGCGCGATGCTCAGCACCGCACCACCATCGACAAGGGCCGCGCTTCCTACGAGCCGAACTCGATTGATG GCGGCTGGCCGAAAGAAACCCCTGCTGCTGCAGTGGACGGCGGCTTCGAGACTTACCCTGAGCGCGTCGAAGCGCACAAGGTGCGTGAGCGCAGCGAATC GTTCGGCGACCACTTCTCGCAGGCTACCCTGTTCTTCCAGAGCATGAGCCACCACGAGAAAGAGCACATCATCGCGGCGTACAGCTTCGAGTTGGGCAAG GTCGAGCGCGAGTACATTCGTGCCCGTCAGGTCAACGAGATTCTGGCCAACATTGATCTTGAGCTGGCCAGCCGTGTGGCTGCCAACCTTGGCTTGCCTG CGCCGACTGCTGGAACCGTGCCTGTTCGTAACACCTCGGTAAAAGAGTCGCCGGCGCTGAGCCAGGTCAATCTGCTGTCGGGTGACATTGTTTCGCGCAA AGTCGCCATCCTTGTCGCCAATGGCGTGGACGGCAAAGCGGTCGAGGCCATGAAGAAGGAACTGACTGCAAAGGGCGCACATGCCAAGGTTCTCGGCCCG ACGTCTGCACCCGTCAAAACTGCTGATGGCGCCAGCCTGCCGGTAGATGCTTCTGCTGAAGGCTTGCCTTCGGTAGCGTTCGACGCGGTGTTTGTGCCGG GCGGCAAGGACTCGGTGAAGGCGTTGAGCACCGATGGCGTGGCGCTGCACTTTATCCTGGAAGCCTACAAGCACCTCAAGGCCATCTCCGTTGCCGGGGA AGCCAAAGAACTGCTGACGTTGCTACGCCTGGAAGAAGATGCAGGCTTGCTGGTTGTGTCCGATAGCAAATCGTTCGAGACGTTCTTCAACGCGATTGCG CAACACCGCGTCTGGGACCGAGAAGTGAAGGCCAAAGCTGTTCCGGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCTAAACGCCAGAGCCAGTCTCGTTCTGGCTGGATTATCGTCCCCACGCTCCAGCGTGGGGACGCATTTCTGGACGTTCTGCGTCCGATCTTGAGTATGC GGCGCGGCGCAGATTTGTGACGCGGAGCGTCACGCACGGCATTCCCACGCGGAGCGTGAGGAACGATAGCTGTCCAAAAGTCCGCTTTTGAAAAAGCAGT TCAGGACCTGGCTGGCGTCAAAACGATGTGCGCTTTTTCATTGCGCTCGATTTCCCGACGCAGTTGCAATTCAAAATCCGGATTGGCCTTGACCACCCGT TTGGTCAGCAATGTGGCCAGCCACGGATAATCTTCGGTGCGCGGCACCACCAACAGCACGTCACAATTGAACGCCACGGTATCCGCTGCAATATCGTCCA GTTGGTGACGCAATGCGCGCATATCGCCGATTTTCAGCTCGATGGTCGTGCTTTCTGCCGACGGATCAACCAGTTTGGCCACCCTTTTGTCTTCAGCAGC
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| Amino Acid Sequence |
>catalase
MASKKAPPATDTSKSQMAGTDTPDRGNTNAKLESLEQFRSDATGQALRTNHGVKISDNQNTLKVGSRGPSLLEDFIMREKITHFDHERIPERIVHARGTA AHGYFQTYENHGALSKAGFLRDPAEKTPVFVRFSTVQGPRGSGDTVRDVRGFAVKFYTGEGNFDLVGNNMPIFFIQDAIKFPDFVHAVKPEPHNEIPTGG SAHDTFWDFVSLVPESAHMVLWTMSDRAIPKSLRTMQGFGIHTFRLINTEGKSSFVKFHWKPKFGVCSLVWDEAQKLAGKDTDFHRRDLWESIEMGDYPE WELGVQIVAEEDEHKFDFDLLDPTKIIPEELVPVTPLGKMVLNRNPDNYFAETEQVAFCPGHIVPGIDFSNDPLLQGRLFSYTDTQISRLGGPNFHEIPI NRPIAPNNNGQRDAQHRTTIDKGRASYEPNSIDGGWPKETPAAAVDGGFETYPERVEAHKVRERSESFGDHFSQATLFFQSMSHHEKEHIIAAYSFELGK VEREYIRARQVNEILANIDLELASRVAANLGLPAPTAGTVPVRNTSVKESPALSQVNLLSGDIVSRKVAILVANGVDGKAVEAMKKELTAKGAHAKVLGP TSAPVKTADGASLPVDASAEGLPSVAFDAVFVPGGKDSVKALSTDGVALHFILEAYKHLKAISVAGEAKELLTLLRLEEDAGLLVVSDSKSFETFFNAIA QHRVWDREVKAKAVPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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