Pseudomonas syringae pv. tomato DC3000, PSPTO_5131 (pilN)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5131
NCBI Old Locus Tag	PSPTO5131
Name	pilN Synonym: PSPTO5131
Replicon	chromosome
Genomic location	5838801 - 5839427 (- strand)

Cross-References

RefSeq	NP_794863.1
GI	28872244
Entrez	1186816
INSDC	AAO58558.1
NCBI Locus Tag	PSPTO_5131
NCBI Old Locus Tag	PSPTO5131
UniParc	UPI000000957E
UniProtKB Acc	Q87V10
UniProtKB ID	Q87V10_PSESM
UniRef100	UniRef100_Q87V10
UniRef50	UniRef50_G3XD30
UniRef90	UniRef90_Q87V10

Product

Feature Type	CDS
Coding Frame	1
Product Name	type IV pilus biogenesis protein PilN
Synonyms
Evidence for Translation
Charge (pH 7)	8.20
Kyte-Doolittle Hydrophobicity Value	0.000
Molecular Weight (kDa)	22.7
Isoelectric Point (pI)	10.66

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 101 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004646 (485 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5131 Search term: pilN Search term: type IV pilus biogenesis protein PilN

Human Homologs

References