Pseudomonas syringae pv. tomato DC3000, PSPTO_5032 (pilI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAACACATATCGTGACGCCCGCGCCTGATGTCGCGCGCTCG TAATCTGACGGGGAACACCCATGGCTCGAATACTGATCGTCGATGACTCGCCGACTGAAATGTACAAACTCACGGGCATGCTGGAAAAGCACGGCCATGA AGTGCTCAAGGCCGAAAACGGCGCTGATGGCGTGGCTCTGGCCCGTCAGGAAAAGCCCGACGCCGTATTGATGGACATCGTCATGCCGGGGCTCAACGGT TTTCAGGCCACGCGCCAGCTGACTAAGGACGCCGACACCAGCAACATTCCGGTGATCATGATCACCACCAAGGATCAGGAAACCGACAAGGTCTGGGGCA AACGCCAGGGCGCGCGGGATTACCTGACCAAGCCGGTAGATGAAGAAACCCTGATGAAAACCCTGAACGCGGTGCTGGCCGGCTGATTGCCGGAATCGCC
DNA Sequence for Gene
>PSPTO_5032 |pilI
ATGGCCGAGCCTCGTACCGCCTTTGAACTGCTGCTGGATATGGACCGACGCTGCCGTTCGCTGGCGGCGGGCCTGCCGTTGCAGGAAACCCACCAGCAGG ACTGGGTCGGGATTGGCTTTCGCATGGGCGATCAGCGTTTTGTGGCACCGATCGGTGAAATCGCCGAAATTCTCCATGAGCCCCGACACGCTGTCATGCC CGGCGTGAAATTCTGGGTGGCGGGTGTCGCCAATCTGCGCGGTCGGCTGTTGCCGCTCATGGACTTGTGCGGGTTCTTCGGTCACGAACTGACGTCGGCA CGCAAGCAGCGCCGGGTAATGGTGGTCGAGTACAACGACATATTTGCCGGCCTGGTGGTCGATGAGGTGTTCGGCATGCAGCGTTTCAGTCAGTTGAGCC TGATACCCCACACCCCGCAGGACGTCGATCAGCGCCTCGTGCCGTTCCTGCGGGGTCAGTTCATTCGCGAGCAGGCCTGGCAGATATTCAGCCCGTGGGC GTTGGTGCAGTCTGCAGATTTCATGGACCTGGCGTCCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTCACAATTGGTCCAGGCGGGGGCCTGATTAATGAGCAGTACAGACAGGTCAAGGGAAGGTGCACGAAGCCGTACGCAGATTATTCTGCTGTTCGTCGC GTTGATTGTTTTCATCATGTTGCTGTTCGCCAACTTCGCGTACCTCAATACTCAGTCGAACTACGACAAGCAGTACATCGGGCATGCCGGTGAGCTGCGC GTGCTGTCCCAGCGCATCGCCAAGAACGCCACGGAAGCGGCTGCCGGCAAAACCCAGGCGTTCAAATTGCTGGCCGATGCGCGCAACGATTTCGACGTGC GCTGGGGCTACCTGAGAAAAGGCGACCCGGCCACCGGGCTGCCTGCGGCTCCCGAGCTGATACGCGACGAATTGCGCACCGTGCAACGAGACTGGGAAGG GCTGCGCAAGAGTACCGACGTGATTCTGGCCAGCGAGCAGACCGTCCTTTCGCTGCATCAGGTGGCGGCGACCCTGGCCGAAACCATTCCGCAGTTGCAG
Amino Acid Sequence
>type IV pilus protein PilI
MAEPRTAFELLLDMDRRCRSLAAGLPLQETHQQDWVGIGFRMGDQRFVAPIGEIAEILHEPRHAVMPGVKFWVAGVANLRGRLLPLMDLCGFFGHELTSA RKQRRVMVVEYNDIFAGLVVDEVFGMQRFSQLSLIPHTPQDVDQRLVPFLRGQFIREQAWQIFSPWALVQSADFMDLAS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site