Pseudomonas syringae pv. tomato DC3000, PSPTO_4489 (rbfA)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4489
NCBI Old Locus Tag	PSPTO4489
Name	rbfA Synonym: PSPTO4489
Replicon	chromosome
Genomic location	5056032 - 5056448 (- strand)

Cross-References

RefSeq	NP_794242.1
GI	28871623
Entrez	1186170
INSDC	AAO57937.1
NCBI Locus Tag	PSPTO_4489
NCBI Old Locus Tag	PSPTO4489
UniParc	UPI000000932E
UniProtKB Acc	Q87WQ6
UniProtKB ID	RBFA_PSESM
UniRef100	UniRef100_Q87WQ6
UniRef50	UniRef50_Q4KIF5
UniRef90	UniRef90_Q87WQ6

Product

Feature Type	CDS
Coding Frame	1
Product Name	ribosome-binding factor A
Synonyms
Evidence for Translation
Charge (pH 7)	-0.80
Kyte-Doolittle Hydrophobicity Value	-0.464
Molecular Weight (kDa)	15.4
Isoelectric Point (pI)	6.69

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 507 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004388 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4489 Search term: rbfA Search term: ribosome-binding factor A

Human Homologs

References