Pseudomonas syringae pv. tomato DC3000, PSPTO_4175 (aauS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GACCATCGCGCAGATCAAGGTCCTGGGCCGCAGCAAGGCCGAAGCCACCGAAAAAGGCCTCAAGCTGCTCGACCGCGTCGGTCTGTCCGAGCATGCTCAC AAGCATCCGGGTCAGCTTTCCGGTGGTCAGCAACAGCGCGTTGCCATTGCCCGCGCGCTGGCAATGGACCCGGTGGTCATGCTGTTCGACGAACCGACCT CCGCGCTGGACCCGGAAATGGTCAATGAAGTGCTCGACGTGATGGTGCAACTGGCTCACGAAGGCATGACCATGATGTGCGTGACCCACGAGATGGGTTT CGCTCGCAAGGTCGCCAACCGGGTAATCTTCATGGACAAGGGGCAGATCGTCGAAGATTGCGCGAAAGAAGAGTTTTTCGGTGACGTCAGTGCACGCTCC GAACGCGCTCAGCAGTTCCTCGCCACGATTCTCCAGCACTAAGCAAGCCCTCACAGCTGCCTGACCCTCTCAGGCAGCTGTTCGGTCCAGGACGACTGTG
DNA Sequence for Gene
>PSPTO_4175 |aauS
ATGAAATGCGACCCCACTCTTTATCGCGCCGCGCCGCCATCACTCGCCGTGAAACCCCGTCTGATTCGCCAGCTGTTTCTGCCACCGTTGATCCTCATGC TGATGATCGGGCTGGGCTATGTCGCCTATCTGGTCAGCGAGCACAATGGCATCAAGACACTGCGCGAAAGCGGCGAACGCCAGCTTGAGCTGCACGCCCG AACGGTCGAGAGCGAAATCAGCAAGTACACTTACCTGCCTAGCGTGCTGGAGCTTGAATCCAGCGTGTCACAATTGCTGAATGCCCCCAGCCCGGAGGCT CAGCAGCAAGTCAACCTTTACCTCGAAGGGATGAACCGGCGCAGCCGCAGCCGTGCCATCTACGTGCTGGACACTACCGGTCGCGTGCTGGCGACCAGCA ACTGGCGCGACGCCGACAGTTATCAGGGTGAAGACCTGTCGTTCCGCGCCTATTTCAAGGATGCGGTGCGCGGTCTGCCGGGGCGCTTTTACGGGATCGG CACCACCACCGGCGAGTCGGGCTACTACCTGGCTCACGGGCTGGAGGAAAAAGGCCGAATCATTGGTGTTGCGGTCATCAAGGTACGCCTTGAAGCACTG GAAGAGCGCTGGCAGCGGGCGCGCCTGGAAGCCTTTGTCAGCGACGAGAACGGTATCATCATTCTCTCCAGTGACCCGGCACGACGCCTGAAGTCGGTGC GCCCGCTCACGCCGGACGTCAAGGAGCGACTGGCGCGCAGCCTGCAATACTACTGGTGGCCACTCAATGAGCTGGTGCCGCTTGAACGGGAAGTCCTGTC AGAAGGTGTCGAGAAACTTGTTTTCCCGGCCAATGTCAGTGTCGATCGGGAGCACAAGCAGGTCAGTTATCTGGCCCAGACCCGCGCGTTGAGCGACACC TCCTGGCACCTGACACTGCTGACCCCGCTTGAGGACCTGCGCCGCGAGGCTGCAAACCAGGGCATGCTGGTGGCGGTGGCCTGCGCACTGGTGACCTTTC TGCTGATCGCCTGGAATGAACGGCGCAAAGTCATCTCGACCCGGCTGGCCGCCAGAGAAGCGCTGCAGGCTGCCAATGATGAGCTGGAACGCAAGATTAC CGAGCGCACCGAACACCTGCGCGCCAGCAACGAACGCCTCAAGGCGCAGATTCGCGAGCGAAGGCTGGCGGAAGAAACCCTGCGCACCGCTCAGGACGAG CTGGTACAGGCCGGTAAACTGGCCGCCATCGGGCAGATGTCGACCAGCATTGCTCATGAACTGAATCAGCCACTGGCGGCACTGCGCACCCTGTCCGGCA ACACCGTAAGGTTTCTGGAGCGTGGCGCGCTGGACACCGCTAGTGCCAACCTGCGCACCATCAATGATCTGGTTGACCGCATGGGCCGCATCACCGCCAG CCTGCGCGCGTTTGCCCGGCGCGGCGATGATCAGGGCCAGGCGCAATTGAGCAAGGCAGTGGACGCCGCGTTGCAATTGCTCGGTGTGCGCCTCGAGCAG TCCGGCCTGACGCTGCACCGCGATTTTGTCGAGGCCACCCTGACCATTGATCAGACCCGCCTTGAGCAGATTCTGGTCAACCTGATCGGCAATGCACTGG ACGCCATGTTCACCCAACCGCAGCCGGAGCTGTGGCTTGAAGGGTCAGTTGTCGACGGTCGCTACCGCTTGCAGGTACGCGACAACGGTCACGGCGTCGA TGCCCAAGCACGCAAGCACCTGTTCGAGCCGTTCTTCACGACCAAACCGGGCGAGCAAGGCCTGGGACTGGGCCTGACCCTGTCAGCGAGCCTTGCCGCC GCAGCCGGGGGCAACCTGAGCGCGGAGCATCCGGGCGACGGCGGCACTACCTTTGTCCTGAGCCTGCCGTTTATTGCGCATGCCCCGACCGATCCTCGCT CGGGCACCCCTCGCCCGGGCGGGCCGACATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAAGAAAGCCATGAGCATCAACAGCGAACTCACTGTCCTGATCGTCGAAGACGACCCGCACGTATTGCTGGGCTGCCAGCAGGCGCTGGCGCTGGAAGAC ATTGCCAGCGAAGGCGTATCAAGCGCCGAGGATGCCCTCAAGCGCATCGGCGACAATTTCGCCGGCATTGTCATCAGCGACATCCGCTTGCCGGGCATCG ACGGGCTGGAGCTGCTGAGCCGTCTCAAGGCACGCGACAGCAGCCTGCCGGTGGTGCTGATTACCGGGCACGGCGACATCACCATGGCCGTCAACGCGAT GCGCGACGGCGCCTACGATTTCATGGAAAAACCCTTCTCTCCCGAGCGACTGGTCGAGGTCACGCGGCGCGCTCTGGAGCAACGCGGGCTGGCGCGGGAG GTCTGGTCGCTGCGCAAGCAACTGGCTGAGCGTGACTCGCTGGAAGGCCGGATCATCGGTCGCTCGCCAGTCATGCAAAACCTGCGCGCATTGATTGCCA
Amino Acid Sequence
>sensor histidine kinase
MKCDPTLYRAAPPSLAVKPRLIRQLFLPPLILMLMIGLGYVAYLVSEHNGIKTLRESGERQLELHARTVESEISKYTYLPSVLELESSVSQLLNAPSPEA QQQVNLYLEGMNRRSRSRAIYVLDTTGRVLATSNWRDADSYQGEDLSFRAYFKDAVRGLPGRFYGIGTTTGESGYYLAHGLEEKGRIIGVAVIKVRLEAL EERWQRARLEAFVSDENGIIILSSDPARRLKSVRPLTPDVKERLARSLQYYWWPLNELVPLEREVLSEGVEKLVFPANVSVDREHKQVSYLAQTRALSDT SWHLTLLTPLEDLRREAANQGMLVAVACALVTFLLIAWNERRKVISTRLAAREALQAANDELERKITERTEHLRASNERLKAQIRERRLAEETLRTAQDE LVQAGKLAAIGQMSTSIAHELNQPLAALRTLSGNTVRFLERGALDTASANLRTINDLVDRMGRITASLRAFARRGDDQGQAQLSKAVDAALQLLGVRLEQ SGLTLHRDFVEATLTIDQTRLEQILVNLIGNALDAMFTQPQPELWLEGSVVDGRYRLQVRDNGHGVDAQARKHLFEPFFTTKPGEQGLGLGLTLSASLAA AAGGNLSAEHPGDGGTTFVLSLPFIAHAPTDPRSGTPRPGGPT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site