Pseudomonas syringae pv. tomato DC3000, PSPTO_4173 (aatM)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATCTGGTACTTTCTGGTGCCTGATCTGCTGCCTGCAGACCTGCAGGAGTGGTACAAGCAGGACCTCAACCCGACCACCTCGGCGTTTCTGAGCGTTGTCG TGTGTCTGGGTCTGTTCACTGCTGCACGGGTCTGCGAACAAGTCCGCACCGGCATCGAGGCGTTGCCAAAGGGCCAGGAATCAGCCGCACGCGCCATGGG CTTCAAGCTGCCACAGATCTACTGGAACGTGCTGTTGCCGCAAGCCTACCGGATCATCATTCCGCCGCTCACCTCCGAATTCCTGAACGTGTTCAAGAAC TCCTCGGTAGCGTCGCTGATCGGCCTGATGGAGCTGCTCGCACAGACCAAACAGACCGCCGAGTTTTCCGCCAACCTGTTTGAAGCTTTCACCCTGGCGA CCCTCATCTACTTCACGCTGAACATGAGCCTGATGCTGCTGATGCGCATGATCGAGAAGAAAGTTGCCGTGCCCGGCCTGATCTCTCTGGGAGGCAAATA
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| DNA Sequence for Gene |
>PSPTO_4173
|aatM
ATGGACTTTACTGGAATCGTGCCAGCCATTCCCGGCCTGTGGAACGGCATGGTCATGACCCTCAAGCTGATGAGCCTGGGCATAGTCGGCGGCCTGGTGC TCGGCACCGTGCTGGCGCTGATGCGCCTGTCATCGAACAAGCTGTTGGCCAATGTGGCTGGCGCGTACGTGAACTACTTTCGCTCGATCCCGCTGCTGCT GGTGATCACCTGGTTCTATCTGGCAGTGCCGTTCGTGCTGCGCTGGATTACCGGTGAAGACACGCCCATCGGTGCGTTCGCGTCCTGCGTCGTGGCGTTC ATGATGTTCGAGGCGGCGTACTTCTGCGAAATCGTCCGTGCCGGCGTGCAATCGATATCCAAGGGTCAAATGGGCGCGGCGCAGGCACTGGGCATGAATT ACTCGCAGATGATGCGCCTGATCATCCTGCCCCAGGCGTTTCGCAAGATGACGCCGCTGTTGCTGCAACAAAGCATCATTCTGTTTCAGGACACCTCTCT GGTGTACACCGTGGGCCTTGTGGACTTCCTCAACGCATCGCGTTCGAGCGGCGACATCATCGGTCGCGCCAACGAGTTCCTGATCATTGCCGGTCTGGTG TATTTCACGATCAGCTTTGCCGCCTCGCTGCTGGTGAAGCGTCTGCAAAAAAGGTTTGCCGTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTTCCATCAAGAACGTCAACAAGTGGTACGGGGACTTCCAGGTACTGACCGATTGCAGCACCGAGGTCAGCAAGGGTGAAGTGGTGGTTGTCTGCGGGCC GTCCGGCTCCGGCAAATCGACCCTGATCAAATGCGTCAATGCGCTGGAGCCGTTCCAGAAAGGCGACATCGTCGTCGATGGCACATCGATCTCCGAGCCA AAAACCAATCTGCCGAAACTGCGCTCGCGGGTCGGCATGGTGTTTCAGCATTTCGAACTGTTTCCGCACTTGAGCATCGTCGAAAACCTGACCATCGCGC AGATCAAGGTCCTGGGCCGCAGCAAGGCCGAAGCCACCGAAAAAGGCCTCAAGCTGCTCGACCGCGTCGGTCTGTCCGAGCATGCTCACAAGCATCCGGG TCAGCTTTCCGGTGGTCAGCAACAGCGCGTTGCCATTGCCCGCGCGCTGGCAATGGACCCGGTGGTCATGCTGTTCGACGAACCGACCTCCGCGCTGGAC
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| Amino Acid Sequence |
>amino acid ABC transporter permease
MDFTGIVPAIPGLWNGMVMTLKLMSLGIVGGLVLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVPFVLRWITGEDTPIGAFASCVVAF MMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRSSGDIIGRANEFLIIAGLV YFTISFAASLLVKRLQKRFAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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