Pseudomonas syringae pv. tomato DC3000, PSPTO_3971 (pal)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TGATTCTTCGATTGATACTGAACCTTTCTTCGGCAAGGACGGGTCTACGCTATACTTCACGTCGGACCGTGGCGGGAAGCCACAGATCTACAAGACAAAC ATTAATGGCGGCGGTGCCGAACGTGTAACGTTCGTGGGTAACTACAACGCCAACCCGAAATTGTCAGCCGATGAAAAGACGCTGGTAATGATTCACCGGC AGGACGGCTTCACTAATTTCAAGGTGGCAGTGCAGGATTTGGCCCGCGGTAGCGTAAAAATCCTCACAGATAGCAACCTTGATGAGTCGCCTACTGTTGC GCCCAACGGCACCATGGTAATCTACGCCACCCGCCAGCAGGGCCGGGGAGTCTTGATGCTCGTGTCCATCAATGGACGCGTAAGGCTCCCGCTTCCTACC GCTCAAGGCGAAGTCAGAGAACCTTCCTGGTCCCCTTACCTGAACTGACGCGGCGCTACACGATTTGCTTAACACACTGGGGTTCATTAGGAGTTTCAAG
DNA Sequence for Gene
>PSPTO_3971 |pal
ATGGAAATGCTGAAGTTTGGTAAATTTGCTGCGCTGGCTCTGGCCATGGCTGTAGCTGTAGGTTGCTCGTCCAAAGGCGGCGACAATGCCGGTGCAGGCG GTGCTGTTGATCCTAACGCTGGTTACGGCGCCAACACCGGTGCAGTTGACGGCTCCCTGAGCGAAGAAGCTGCTCTGCGCGCAATCACCACCTTCTACTT CGAATACGACAGTTCGGACTTGAAGCCAGAAGCCATGCGCTCCCTGGACGTGCACGCCAAAGACCTGAAAGCTAACGGCGCTCGCGTTGTTCTGGAAGGC AACACTGACGAACGTGGTACTCGCGAGTACAACATGGCACTGGGCGAGCGTCGTGCGAAAGCCGTTCAACGCTACCTGGTTCTGCAAGGTGTTTCCCCAG CTCAGCTGGAACTGGTTTCCTACGGCGAAGAGCGTCCAGTTGCTACCGGCAACGACGAGCAGTCCTGGGCTCAAAACCGTCGCGTCGAACTGCGTAAGTA A
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTGACATGCGAACGTGCCGACGTGCTCTAACCGTTTTGGCCCTCGCCCTTCCGCTTTCAGCGTTGGGTGCGGCACCTGTGGTCGATAACAATTCTGGCT CTGGCAGCAGCAGTTATCCGCCAGCGGGTTATGGCACGTCCGGCGCCTATGCCGGGGGAGGGGTTACGGCCCCTGCCTCGGCACAAGGTCAGCTGTTCAT GCAATTGCAGCAAATGCAGGACGAAATCGCGCGTTTGCGCGGTGTTGTCGAGGTCCAGCAAAACGACATCCAGCGCATGAAGCAAGAAGCTCTGGAGCGT TATCAGGAACTCGATCAACGCATAGCCAGTGGCGCATCCGCTCCGGCTACCAATAATTCTCAACCTTCTGGTGGCGCTATCGACGCCAGTGGGACGCCTT CGGCCTCAGCGGCTCAGCAGGCACCGGCAGCAGGCACCGAGCCTCCTGATCCGGCGAAGGAAAAGCTGTATTACGAAGCGGCCTTCGATTTGATCAAGGC
Amino Acid Sequence
>peptidoglycan-associated lipoprotein
MEMLKFGKFAALALAMAVAVGCSSKGGDNAGAGGAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEG NTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site