Pseudomonas syringae pv. tomato DC3000, PSPTO_3832 (fabG)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACAAGGTGAAGTTGTCAGTGCCGTGAATTTCAACTCGCCGGGTCAGGTGGTCATTGCCGGTTCCGCCGAGGCCGTCAAGCGCGCCATGGAGCTGTGCAA GGCGCGAGGCGCCAAGCGTGCCTTGCCGTTGCCGGTCAGCGTGCCATCACACTGCGAACTGATGCGTCCTGCTGCAGAGCGTTTCGTCGAGGCGGTCGAA GCCATTGAATGGCAAGCGCCCTCGATAGCGTTGGTGCAGAACGTCAGCGCCAGCGCGGTCAGTGACCTGGCGACGCTCAAGCGTGATCTTCTGGAACAGT TGTACAAGCCGGTTCGCTGGGTTGAATCCATTCAATGTCTGGCGAGCCACGGTGCAACCCGGCTTGTGGAATGCGGGCCGGGCAAAGTGCTGGCTGGTCT GAACAAGCGTTGCGCCGAAGGCGTGATTACTTACAACCTTGACACCCCGGACGCCTTTGCCGCCGCACGCGCGGCACTGGCCTGATTAGGAGACGCCTGT
|
|
| DNA Sequence for Gene |
>PSPTO_3832
|fabG
ATGAGCCTTCAAGGTAAAGTTGCACTGGTAACCGGTGCCAGTCGCGGTATTGGTCAAGCCATTGCGCTTGAGTTGGGACGCAATGGTGCGGTCGTTGTAG GCACTGCGACCTCCGAGTCCGGCGCCGAGCGCATCAGCGCAACGTTCAAGGAAAGCGGCATCGAAGGCTTTGGCCTGATGCTGGATGTCTGCGATGCAGA GTCTGTGAGTTCTGTTCTGTCGACCATTCAGGAGCGCGTAGGCGCACCGTTGATTCTGGTCAATAATGCCGGTATCACCCGTGATAACCTGGTGATGCGC ATGAAAGATGACGAATGGTACGATGTCGTCAATACCAACCTGAACAGCCTTTTCCGTCTTTCCAAGGGTGTTCTGCGCGGCATGACCAAAGCGCGTTGGG GACGAATTATCAGCATTGGTTCGGTTGTGGGTGCCATGGGCAACGCCGGTCAAGTAAACTATGCTTCCGCGAAGGCCGGGCTGGAAGGTTTCAGCAGGGC CTTGGCCCGTGAAGTCGGGTCGCGTGCAGTGACCGTGAACTCGGTTGCACCAGGTTTCATCGACACCGACATGACGCGTGAGCTGCCAGAGGCTCAGCGT GAATCACTGATTACCCAGATACCCCTGGGCCGTCTGGGGCAGGCAGAAGAGATTGCGCACGTAGTCGCTTTTCTTGCTTCCGAAGGCGCAGGTTACGTTA CCGGGGCTACAATCCCGGTCAACGGCGGCATGTACATGAGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGTGGCGATCTGTTTCAAAAAAATGTCATACGATTTTGTCTAAAATCCGTTATAAAGCTGCAATCTATGAATGGGTGAAGGTACGGTTGGGCATAAGGGG AGAGCGTTAAGCTTGAAATTCGCAAAACCTCTTCTATACACTTACCCACTGGCCAGATGCCTGAACATTTCCACTAGGAGTTAAAACTAGGTATGAGCAC CATCGAAGAGCGCGTCAAGAAAATCGTTGCCGAGCAACTTGGCGTCAAATCAGAAGAGGTTGTCAACACTGCTTCTTTCGTTGAAGACCTGGGCGCTGAC TCCCTGGACACCGTTGAGCTGGTAATGGCTCTGGAAGAGGAATTCGAGACCGAAATCCCTGACGAAGAAGCGGAAAAGATCACGACCGTTCAAGCAGCAA TCGACTACGTCAACAGCCATCAGGCTTAAGATTTGTAATCGCTGACTGCTGTCACGGGAAAACCGCACTGCTTTAATCGGCGTGCGGTTTTTTCTTTAAA
|
|
| Amino Acid Sequence |
>3-ketoacyl-(acyl-carrier-protein) reductase
MSLQGKVALVTGASRGIGQAIALELGRNGAVVVGTATSESGAERISATFKESGIEGFGLMLDVCDAESVSSVLSTIQERVGAPLILVNNAGITRDNLVMR MKDDEWYDVVNTNLNSLFRLSKGVLRGMTKARWGRIISIGSVVGAMGNAGQVNYASAKAGLEGFSRALAREVGSRAVTVNSVAPGFIDTDMTRELPEAQR ESLITQIPLGRLGQAEEIAHVVAFLASEGAGYVTGATIPVNGGMYMS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|