Pseudomonas syringae pv. tomato DC3000, PSPTO_3582 (katB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF038928
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006979 response to oxidative stress
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF038928
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004096 catalase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF038928
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pst01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst00380 Tryptophan metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst00630 Glyoxylate and dicarboxylate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 385 403 -
FunFam G3DSA:2.40.180.10:FF:000002 Catalase - - 27 500 0.0
PANTHER PTHR11465 CATALASE IPR018028 Catalase, mono-functional, haem-containing 27 494 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 385 415 -
PRINTS PR00067 Catalase signature IPR018028 Catalase, mono-functional, haem-containing 341 367 1.2E-67
PRINTS PR00067 Catalase signature IPR018028 Catalase, mono-functional, haem-containing 106 124 1.2E-67
SMART SM01060 Catalase_2 IPR011614 Catalase core domain 31 411 0.0
CDD cd08154 catalase_clade_1 - - 29 494 0.0
Pfam PF00199 Catalase IPR011614 Catalase core domain 31 408 0.0
PRINTS PR00067 Catalase signature IPR018028 Catalase, mono-functional, haem-containing 127 144 1.2E-67
Pfam PF06628 Catalase-related immune-responsive IPR010582 Catalase immune-responsive domain 433 493 4.8E-15
PRINTS PR00067 Catalase signature IPR018028 Catalase, mono-functional, haem-containing 44 67 1.2E-67
PRINTS PR00067 Catalase signature IPR018028 Catalase, mono-functional, haem-containing 146 164 1.2E-67
PRINTS PR00067 Catalase signature IPR018028 Catalase, mono-functional, haem-containing 309 336 1.2E-67
PIRSF PIRSF038928 Catalase_clade1-3 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 22 500 0.0
SUPERFAMILY SSF56634 Heme-dependent catalase-like IPR020835 Catalase superfamily 25 499 0.0
Gene3D G3DSA:2.40.180.10 Catalase core domain - - 27 510 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.