Pseudomonas syringae pv. tomato DC3000, PSPTO_3461 (glpQ)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3461
NCBI Old Locus Tag	PSPTO3461
Name	glpQ Synonym: PSPTO3461
Replicon	chromosome
Genomic location	3903238 - 3904356 (+ strand)

Cross-References

RefSeq	NP_793241.1
GI	28870622
Entrez	1185126
INSDC	AAO56936.1
NCBI Locus Tag	PSPTO_3461
NCBI Old Locus Tag	PSPTO3461
UniParc	UPI0000008F69
UniProtKB Acc	Q87ZG8
UniProtKB ID	Q87ZG8_PSESM
UniRef100	UniRef100_Q87ZG8
UniRef50	UniRef50_D7I1J1
UniRef90	UniRef90_D7I1J1

Product

Feature Type	CDS
Coding Frame	1
Product Name	glycerophosphoryl diester phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7)	-1.31
Kyte-Doolittle Hydrophobicity Value	-0.315
Molecular Weight (kDa)	40.8
Isoelectric Point (pI)	6.65

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 391 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000339 (769 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3461 Search term: glpQ Search term: glycerophosphoryl diester phosphodiesterase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000261386 glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:29644] E-value: 5.6e-08 Percent Identity: 48.2

References